Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab4aP56371 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.81□□□□□ -0.36
Rab4aP56371 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab4aP56371 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rab4aP56371 Gm13146-201ENSMUST00000118508 780 ntBASIC12.81□□□□□ -0.36
Rab4aP56371 Gm13534-201ENSMUST00000121169 513 ntBASIC12.81□□□□□ -0.36
Rab4aP56371 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab4aP56371 Gm26833-201ENSMUST00000180899 440 ntBASIC12.81□□□□□ -0.36
Rab4aP56371 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC12.81□□□□□ -0.36
Rab4aP56371 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab4aP56371 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Rab4aP56371 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC12.81□□□□□ -0.36
Rab4aP56371 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab4aP56371 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab4aP56371 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab4aP56371 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab4aP56371 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab4aP56371 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab4aP56371 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab4aP56371 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab4aP56371 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab4aP56371 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rab4aP56371 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rab4aP56371 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.81□□□□□ -0.36
Rab4aP56371 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.8□□□□□ -0.36
Rab4aP56371 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rab4aP56371 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC12.8□□□□□ -0.36
Rab4aP56371 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rab4aP56371 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rab4aP56371 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rab4aP56371 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rab4aP56371 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rab4aP56371 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rab4aP56371 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Rab4aP56371 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Rab4aP56371 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Rab4aP56371 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Rab4aP56371 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.79□□□□□ -0.36
Rab4aP56371 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.79□□□□□ -0.36
Rab4aP56371 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rab4aP56371 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab4aP56371 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab4aP56371 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab4aP56371 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.78□□□□□ -0.36
Rab4aP56371 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab4aP56371 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rab4aP56371 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab4aP56371 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab4aP56371 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Rab4aP56371 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab4aP56371 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab4aP56371 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rab4aP56371 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms