Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox3P53784 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.45■□□□□ 0.06
Sox3P53784 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.45■□□□□ 0.06
Sox3P53784 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.45■□□□□ 0.06
Sox3P53784 Gm7862-201ENSMUST00000121461 292 ntBASIC15.45■□□□□ 0.06
Sox3P53784 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Sox3P53784 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.45■□□□□ 0.06
Sox3P53784 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.45■□□□□ 0.06
Sox3P53784 Gm43575-201ENSMUST00000196420 516 ntBASIC15.45■□□□□ 0.06
Sox3P53784 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Sox3P53784 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Sox3P53784 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sox3P53784 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox3P53784 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox3P53784 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox3P53784 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox3P53784 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox3P53784 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox3P53784 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Sox3P53784 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox3P53784 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Sox3P53784 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sox3P53784 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox3P53784 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox3P53784 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox3P53784 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sox3P53784 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.44■□□□□ 0.06
Sox3P53784 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox3P53784 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Sox3P53784 Gm6736-201ENSMUST00000166583 948 ntBASIC15.44■□□□□ 0.06
Sox3P53784 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sox3P53784 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Sox3P53784 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Sox3P53784 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox3P53784 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox3P53784 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox3P53784 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox3P53784 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox3P53784 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Sox3P53784 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox3P53784 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox3P53784 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox3P53784 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Sox3P53784 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.43■□□□□ 0.06
Sox3P53784 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.43■□□□□ 0.06
Sox3P53784 Gm11779-201ENSMUST00000118541 368 ntBASIC15.43■□□□□ 0.06
Sox3P53784 Mir5131-201ENSMUST00000175426 93 ntBASIC15.43■□□□□ 0.06
Sox3P53784 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.43■□□□□ 0.06
Sox3P53784 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.43■□□□□ 0.06
Sox3P53784 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sox3P53784 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sox3P53784 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox3P53784 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox3P53784 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox3P53784 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox3P53784 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox3P53784 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox3P53784 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
Sox3P53784 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox3P53784 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.42■□□□□ 0.06
Sox3P53784 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.42■□□□□ 0.06
Sox3P53784 Gm5264-201ENSMUST00000190584 848 ntBASIC15.42■□□□□ 0.06
Sox3P53784 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.42■□□□□ 0.06
Sox3P53784 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sox3P53784 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Sox3P53784 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox3P53784 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox3P53784 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox3P53784 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sox3P53784 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Sox3P53784 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Sox3P53784 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox3P53784 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox3P53784 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sox3P53784 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sox3P53784 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sox3P53784 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms