Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
RoraP51448 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RoraP51448 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RoraP51448 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.26■□□□□ 0.03
RoraP51448 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RoraP51448 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RoraP51448 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.26■□□□□ 0.03
RoraP51448 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RoraP51448 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RoraP51448 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RoraP51448 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RoraP51448 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RoraP51448 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RoraP51448 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RoraP51448 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RoraP51448 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.25■□□□□ 0.03
RoraP51448 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RoraP51448 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RoraP51448 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RoraP51448 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RoraP51448 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RoraP51448 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RoraP51448 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RoraP51448 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.25■□□□□ 0.03
RoraP51448 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RoraP51448 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.25■□□□□ 0.03
RoraP51448 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RoraP51448 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RoraP51448 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RoraP51448 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RoraP51448 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RoraP51448 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RoraP51448 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RoraP51448 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.24■□□□□ 0.03
RoraP51448 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RoraP51448 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RoraP51448 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.24■□□□□ 0.03
RoraP51448 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RoraP51448 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
RoraP51448 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.24■□□□□ 0.03
RoraP51448 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RoraP51448 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
RoraP51448 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RoraP51448 Gm11452-201ENSMUST00000122376 690 ntBASIC15.24■□□□□ 0.03
RoraP51448 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RoraP51448 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.24■□□□□ 0.03
RoraP51448 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RoraP51448 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RoraP51448 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
RoraP51448 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RoraP51448 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.24■□□□□ 0.03
RoraP51448 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RoraP51448 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RoraP51448 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RoraP51448 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RoraP51448 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RoraP51448 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RoraP51448 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RoraP51448 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RoraP51448 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.23■□□□□ 0.03
RoraP51448 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RoraP51448 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RoraP51448 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RoraP51448 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RoraP51448 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RoraP51448 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RoraP51448 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.23■□□□□ 0.03
RoraP51448 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.23■□□□□ 0.03
RoraP51448 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RoraP51448 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RoraP51448 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RoraP51448 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
RoraP51448 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
RoraP51448 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.23■□□□□ 0.03
RoraP51448 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.23■□□□□ 0.03
RoraP51448 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.23■□□□□ 0.03
RoraP51448 Rps4l-201ENSMUST00000071745 943 ntBASIC15.23■□□□□ 0.03
RoraP51448 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RoraP51448 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RoraP51448 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RoraP51448 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RoraP51448 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RoraP51448 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RoraP51448 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.23■□□□□ 0.03
RoraP51448 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RoraP51448 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RoraP51448 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RoraP51448 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.22■□□□□ 0.03
RoraP51448 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
RoraP51448 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RoraP51448 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RoraP51448 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RoraP51448 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RoraP51448 Gm36967-201ENSMUST00000193814 266 ntBASIC15.22■□□□□ 0.03
RoraP51448 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.22■□□□□ 0.03
RoraP51448 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RoraP51448 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RoraP51448 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RoraP51448 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
RoraP51448 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms