Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.45□□□□□ -0.26
Nkx2-1P50220 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-1P50220 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.44□□□□□ -0.26
Nkx2-1P50220 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.44□□□□□ -0.26
Nkx2-1P50220 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.44□□□□□ -0.26
Nkx2-1P50220 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-1P50220 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-1P50220 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.43□□□□□ -0.26
Nkx2-1P50220 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.43□□□□□ -0.26
Nkx2-1P50220 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.43□□□□□ -0.26
Nkx2-1P50220 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-1P50220 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-1P50220 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.42□□□□□ -0.26
Nkx2-1P50220 Asic1-205ENSMUST00000228185 1818 ntBASIC13.42□□□□□ -0.26
Nkx2-1P50220 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Gm29257-201ENSMUST00000186115 639 ntBASIC13.42□□□□□ -0.26
Nkx2-1P50220 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-1P50220 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.42□□□□□ -0.26
Nkx2-1P50220 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-1P50220 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms