Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Brca1P48754 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Brca1P48754 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Brca1P48754 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Brca1P48754 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Brca1P48754 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC18.05■□□□□ 0.48
Brca1P48754 Gm45747-201ENSMUST00000212203 999 ntBASIC18.05■□□□□ 0.48
Brca1P48754 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Brca1P48754 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.05■□□□□ 0.48
Brca1P48754 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.05■□□□□ 0.48
Brca1P48754 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Brca1P48754 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Brca1P48754 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Brca1P48754 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Brca1P48754 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Brca1P48754 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Brca1P48754 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Brca1P48754 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Brca1P48754 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Brca1P48754 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.04■□□□□ 0.48
Brca1P48754 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Brca1P48754 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.04■□□□□ 0.48
Brca1P48754 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC18.04■□□□□ 0.48
Brca1P48754 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Brca1P48754 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Brca1P48754 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Brca1P48754 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Brca1P48754 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Brca1P48754 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.04■□□□□ 0.48
Brca1P48754 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Brca1P48754 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.04■□□□□ 0.48
Brca1P48754 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.03■□□□□ 0.48
Brca1P48754 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Brca1P48754 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Brca1P48754 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.03■□□□□ 0.48
Brca1P48754 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Brca1P48754 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Brca1P48754 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Brca1P48754 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Brca1P48754 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Brca1P48754 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Brca1P48754 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Brca1P48754 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Brca1P48754 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Brca1P48754 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Brca1P48754 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Brca1P48754 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Brca1P48754 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Brca1P48754 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.02■□□□□ 0.48
Brca1P48754 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Brca1P48754 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Brca1P48754 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Brca1P48754 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Brca1P48754 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Brca1P48754 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Brca1P48754 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC18.02■□□□□ 0.47
Brca1P48754 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC18.02■□□□□ 0.47
Brca1P48754 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Brca1P48754 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC18.02■□□□□ 0.47
Brca1P48754 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Brca1P48754 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Brca1P48754 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Brca1P48754 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Brca1P48754 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Brca1P48754 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Brca1P48754 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Brca1P48754 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Brca1P48754 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.01■□□□□ 0.47
Brca1P48754 Gm18489-201ENSMUST00000172565 551 ntBASIC18.01■□□□□ 0.47
Brca1P48754 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Brca1P48754 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Brca1P48754 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Brca1P48754 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Brca1P48754 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Brca1P48754 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Brca1P48754 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC18■□□□□ 0.47
Brca1P48754 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Brca1P48754 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC18■□□□□ 0.47
Brca1P48754 Gm7787-201ENSMUST00000216858 688 ntBASIC18■□□□□ 0.47
Brca1P48754 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18■□□□□ 0.47
Brca1P48754 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Brca1P48754 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Brca1P48754 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Brca1P48754 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Brca1P48754 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18■□□□□ 0.47
Brca1P48754 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Brca1P48754 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Brca1P48754 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Brca1P48754 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18■□□□□ 0.47
Brca1P48754 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Brca1P48754 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Brca1P48754 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Brca1P48754 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Brca1P48754 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC18■□□□□ 0.47
Brca1P48754 Gm13365-201ENSMUST00000121188 973 ntBASIC18■□□□□ 0.47
Brca1P48754 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18■□□□□ 0.47
Brca1P48754 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC18■□□□□ 0.47
Brca1P48754 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18■□□□□ 0.47
Brca1P48754 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Brca1P48754 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms