Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Xcl1P47993 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Xcl1P47993 CT030146.1-201ENSMUST00000220919 217 ntBASIC10.57□□□□□ -0.72
Xcl1P47993 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Xcl1P47993 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Xcl1P47993 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Xcl1P47993 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Xcl1P47993 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Xcl1P47993 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Xcl1P47993 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Xcl1P47993 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Xcl1P47993 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Xcl1P47993 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Xcl1P47993 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC10.56□□□□□ -0.72
Xcl1P47993 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC10.56□□□□□ -0.72
Xcl1P47993 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Xcl1P47993 Gm5067-201ENSMUST00000170449 1009 ntBASIC10.56□□□□□ -0.72
Xcl1P47993 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC10.56□□□□□ -0.72
Xcl1P47993 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC10.56□□□□□ -0.72
Xcl1P47993 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Xcl1P47993 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 AC174678.1-201ENSMUST00000228007 2749 ntBASIC10.56□□□□□ -0.72
Xcl1P47993 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Xcl1P47993 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Xcl1P47993 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Xcl1P47993 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Xcl1P47993 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
Xcl1P47993 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.55□□□□□ -0.72
Xcl1P47993 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Xcl1P47993 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC10.55□□□□□ -0.72
Xcl1P47993 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Xcl1P47993 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 AC137127.1-201ENSMUST00000213466 1078 ntBASIC10.55□□□□□ -0.72
Xcl1P47993 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Xcl1P47993 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Xcl1P47993 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Xcl1P47993 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC10.55□□□□□ -0.72
Xcl1P47993 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC10.55□□□□□ -0.72
Xcl1P47993 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Xcl1P47993 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Xcl1P47993 Gm10605-202ENSMUST00000183019 3198 ntBASIC10.55□□□□□ -0.72
Xcl1P47993 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xcl1P47993 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms