Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sox18P43680 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sox18P43680 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sox18P43680 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.47■□□□□ 0.07
Sox18P43680 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sox18P43680 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sox18P43680 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sox18P43680 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sox18P43680 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sox18P43680 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sox18P43680 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sox18P43680 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Sox18P43680 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sox18P43680 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sox18P43680 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sox18P43680 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox18P43680 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sox18P43680 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.46■□□□□ 0.07
Sox18P43680 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sox18P43680 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sox18P43680 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Sox18P43680 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox18P43680 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox18P43680 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox18P43680 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox18P43680 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox18P43680 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sox18P43680 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.46■□□□□ 0.07
Sox18P43680 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.46■□□□□ 0.07
Sox18P43680 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.46■□□□□ 0.07
Sox18P43680 Gm43930-201ENSMUST00000203868 845 ntBASIC15.46■□□□□ 0.07
Sox18P43680 Gm32390-201ENSMUST00000212713 1172 ntBASIC15.46■□□□□ 0.07
Sox18P43680 Gm8396-201ENSMUST00000057361 823 ntBASIC15.46■□□□□ 0.07
Sox18P43680 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox18P43680 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox18P43680 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.46■□□□□ 0.07
Sox18P43680 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox18P43680 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox18P43680 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sox18P43680 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Sox18P43680 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sox18P43680 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox18P43680 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.45■□□□□ 0.06
Sox18P43680 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox18P43680 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox18P43680 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox18P43680 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sox18P43680 Gm6754-201ENSMUST00000117124 913 ntBASIC15.45■□□□□ 0.06
Sox18P43680 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.45■□□□□ 0.06
Sox18P43680 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.45■□□□□ 0.06
Sox18P43680 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sox18P43680 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sox18P43680 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox18P43680 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox18P43680 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Sox18P43680 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Sox18P43680 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Sox18P43680 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Sox18P43680 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Sox18P43680 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.44■□□□□ 0.06
Sox18P43680 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.44■□□□□ 0.06
Sox18P43680 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.44■□□□□ 0.06
Sox18P43680 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.44■□□□□ 0.06
Sox18P43680 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Sox18P43680 Gm4459-201ENSMUST00000118750 468 ntBASIC15.44■□□□□ 0.06
Sox18P43680 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.44■□□□□ 0.06
Sox18P43680 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.44■□□□□ 0.06
Sox18P43680 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox18P43680 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sox18P43680 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox18P43680 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox18P43680 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox18P43680 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox18P43680 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox18P43680 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Sox18P43680 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox18P43680 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.43■□□□□ 0.06
Sox18P43680 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.43■□□□□ 0.06
Sox18P43680 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms