Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Sdc2P43407 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sdc2P43407 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sdc2P43407 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.16■□□□□ 0.5
Sdc2P43407 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.16■□□□□ 0.5
Sdc2P43407 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Sdc2P43407 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Sdc2P43407 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sdc2P43407 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.15■□□□□ 0.5
Sdc2P43407 Mir1668-201ENSMUST00000184114 107 ntBASIC18.15■□□□□ 0.5
Sdc2P43407 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.15■□□□□ 0.5
Sdc2P43407 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Sdc2P43407 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sdc2P43407 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Sdc2P43407 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sdc2P43407 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sdc2P43407 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.14■□□□□ 0.49
Sdc2P43407 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdc2P43407 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdc2P43407 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdc2P43407 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.14■□□□□ 0.49
Sdc2P43407 Gm7889-201ENSMUST00000185591 958 ntBASIC18.14■□□□□ 0.49
Sdc2P43407 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdc2P43407 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdc2P43407 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdc2P43407 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdc2P43407 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdc2P43407 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sdc2P43407 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.14■□□□□ 0.49
Sdc2P43407 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Sdc2P43407 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.13■□□□□ 0.49
Sdc2P43407 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc2P43407 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc2P43407 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc2P43407 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.13■□□□□ 0.49
Sdc2P43407 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc2P43407 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc2P43407 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc2P43407 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.13■□□□□ 0.49
Sdc2P43407 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc2P43407 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc2P43407 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc2P43407 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc2P43407 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc2P43407 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc2P43407 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc2P43407 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.13■□□□□ 0.49
Sdc2P43407 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.13■□□□□ 0.49
Sdc2P43407 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc2P43407 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sdc2P43407 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.13■□□□□ 0.49
Sdc2P43407 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc2P43407 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.12■□□□□ 0.49
Sdc2P43407 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc2P43407 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc2P43407 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.12■□□□□ 0.49
Sdc2P43407 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc2P43407 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc2P43407 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc2P43407 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.12■□□□□ 0.49
Sdc2P43407 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc2P43407 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc2P43407 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc2P43407 Gm45058-201ENSMUST00000205810 766 ntBASIC18.12■□□□□ 0.49
Sdc2P43407 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc2P43407 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc2P43407 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc2P43407 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc2P43407 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc2P43407 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc2P43407 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc2P43407 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc2P43407 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Sdc2P43407 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.12■□□□□ 0.49
Sdc2P43407 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sdc2P43407 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc2P43407 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc2P43407 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sdc2P43407 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms