Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox5P35710 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Sox5P35710 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sox5P35710 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sox5P35710 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.68■□□□□ 0.42
Sox5P35710 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox5P35710 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox5P35710 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox5P35710 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox5P35710 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sox5P35710 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox5P35710 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox5P35710 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox5P35710 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox5P35710 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sox5P35710 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Sox5P35710 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sox5P35710 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox5P35710 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox5P35710 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.67■□□□□ 0.42
Sox5P35710 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox5P35710 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sox5P35710 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox5P35710 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sox5P35710 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox5P35710 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox5P35710 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.67■□□□□ 0.42
Sox5P35710 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Sox5P35710 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.67■□□□□ 0.42
Sox5P35710 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Sox5P35710 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.67■□□□□ 0.42
Sox5P35710 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.67■□□□□ 0.42
Sox5P35710 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox5P35710 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox5P35710 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox5P35710 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sox5P35710 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox5P35710 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sox5P35710 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox5P35710 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox5P35710 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sox5P35710 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sox5P35710 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox5P35710 Gm16061-201ENSMUST00000122167 857 ntBASIC17.66■□□□□ 0.42
Sox5P35710 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sox5P35710 Gm7213-201ENSMUST00000215977 950 ntBASIC17.66■□□□□ 0.42
Sox5P35710 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox5P35710 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox5P35710 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox5P35710 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sox5P35710 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox5P35710 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox5P35710 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Sox5P35710 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox5P35710 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Sox5P35710 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox5P35710 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox5P35710 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Sox5P35710 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Sox5P35710 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.65■□□□□ 0.42
Sox5P35710 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox5P35710 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox5P35710 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox5P35710 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Sox5P35710 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Sox5P35710 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.65■□□□□ 0.42
Sox5P35710 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox5P35710 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Sox5P35710 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox5P35710 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox5P35710 Gm5417-201ENSMUST00000079706 384 ntBASIC17.65■□□□□ 0.42
Sox5P35710 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sox5P35710 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox5P35710 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox5P35710 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Sox5P35710 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox5P35710 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox5P35710 Asic1-205ENSMUST00000228185 1818 ntBASIC17.65■□□□□ 0.42
Sox5P35710 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox5P35710 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox5P35710 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Sox5P35710 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sox5P35710 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Sox5P35710 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox5P35710 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox5P35710 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox5P35710 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox5P35710 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox5P35710 Gm13474-201ENSMUST00000122466 815 ntBASIC17.64■□□□□ 0.41
Sox5P35710 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.64■□□□□ 0.41
Sox5P35710 Gm2274-201ENSMUST00000184539 609 ntBASIC17.64■□□□□ 0.41
Sox5P35710 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox5P35710 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox5P35710 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.64■□□□□ 0.41
Sox5P35710 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox5P35710 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox5P35710 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox5P35710 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Sox5P35710 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox5P35710 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms