Protein–RNA interactions for Protein: P35584

Foxa3, Hepatocyte nuclear factor 3-gamma, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa3P35584 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa3P35584 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa3P35584 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa3P35584 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa3P35584 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa3P35584 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa3P35584 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa3P35584 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Foxa3P35584 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa3P35584 Mir5133-201ENSMUST00000174955 77 ntBASIC13.55□□□□□ -0.24
Foxa3P35584 Gm10517-202ENSMUST00000192970 758 ntBASIC13.55□□□□□ -0.24
Foxa3P35584 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Foxa3P35584 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa3P35584 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa3P35584 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Foxa3P35584 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa3P35584 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa3P35584 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa3P35584 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.55□□□□□ -0.24
Foxa3P35584 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Foxa3P35584 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Foxa3P35584 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Foxa3P35584 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.55□□□□□ -0.24
Foxa3P35584 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Foxa3P35584 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa3P35584 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa3P35584 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa3P35584 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa3P35584 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa3P35584 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa3P35584 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
Foxa3P35584 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.54□□□□□ -0.24
Foxa3P35584 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Foxa3P35584 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa3P35584 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa3P35584 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa3P35584 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa3P35584 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa3P35584 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa3P35584 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Foxa3P35584 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa3P35584 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Foxa3P35584 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.54□□□□□ -0.24
Foxa3P35584 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.54□□□□□ -0.24
Foxa3P35584 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa3P35584 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Foxa3P35584 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.54□□□□□ -0.24
Foxa3P35584 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa3P35584 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa3P35584 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa3P35584 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa3P35584 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa3P35584 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa3P35584 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Foxa3P35584 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa3P35584 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa3P35584 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa3P35584 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa3P35584 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa3P35584 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa3P35584 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.53□□□□□ -0.24
Foxa3P35584 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.53□□□□□ -0.24
Foxa3P35584 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Foxa3P35584 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Foxa3P35584 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.53□□□□□ -0.24
Foxa3P35584 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.53□□□□□ -0.24
Foxa3P35584 Gm42545-201ENSMUST00000202755 922 ntBASIC13.53□□□□□ -0.24
Foxa3P35584 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Foxa3P35584 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Foxa3P35584 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Foxa3P35584 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Foxa3P35584 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Foxa3P35584 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Foxa3P35584 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Foxa3P35584 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.52□□□□□ -0.25
Foxa3P35584 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.52□□□□□ -0.25
Foxa3P35584 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 161.7 ms