Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Slc6a1P31648 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.95□□□□□ -0.18
Slc6a1P31648 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.95□□□□□ -0.18
Slc6a1P31648 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.95□□□□□ -0.18
Slc6a1P31648 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Slc6a1P31648 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Slc6a1P31648 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Slc6a1P31648 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Slc6a1P31648 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 Gm11927-201ENSMUST00000118472 759 ntBASIC13.94□□□□□ -0.18
Slc6a1P31648 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.94□□□□□ -0.18
Slc6a1P31648 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.94□□□□□ -0.18
Slc6a1P31648 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.94□□□□□ -0.18
Slc6a1P31648 Gm10252-201ENSMUST00000209541 832 ntBASIC13.94□□□□□ -0.18
Slc6a1P31648 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.94□□□□□ -0.18
Slc6a1P31648 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 Zfp783-201ENSMUST00000095946 670 ntBASIC13.94□□□□□ -0.18
Slc6a1P31648 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Slc6a1P31648 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Slc6a1P31648 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Slc6a1P31648 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.94□□□□□ -0.18
Slc6a1P31648 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Slc6a1P31648 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.93□□□□□ -0.18
Slc6a1P31648 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.93□□□□□ -0.18
Slc6a1P31648 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.93□□□□□ -0.18
Slc6a1P31648 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Slc6a1P31648 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc6a1P31648 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc6a1P31648 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc6a1P31648 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc6a1P31648 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Slc6a1P31648 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.92□□□□□ -0.18
Slc6a1P31648 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Slc6a1P31648 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc6a1P31648 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Slc6a1P31648 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc6a1P31648 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.92□□□□□ -0.18
Slc6a1P31648 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc6a1P31648 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.92□□□□□ -0.18
Slc6a1P31648 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc6a1P31648 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.92□□□□□ -0.18
Slc6a1P31648 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Slc6a1P31648 Gm10138-203ENSMUST00000206952 366 ntBASIC13.92□□□□□ -0.18
Slc6a1P31648 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Slc6a1P31648 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms