Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.26■□□□□ 0.35
Mmp3P28862 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp3P28862 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp3P28862 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.26■□□□□ 0.35
Mmp3P28862 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp3P28862 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Mmp3P28862 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp3P28862 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Mmp3P28862 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp3P28862 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp3P28862 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Mmp3P28862 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.26■□□□□ 0.35
Mmp3P28862 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.26■□□□□ 0.35
Mmp3P28862 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.26■□□□□ 0.35
Mmp3P28862 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp3P28862 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp3P28862 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
Mmp3P28862 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
Mmp3P28862 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp3P28862 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.26■□□□□ 0.35
Mmp3P28862 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp3P28862 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp3P28862 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp3P28862 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp3P28862 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp3P28862 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.26■□□□□ 0.35
Mmp3P28862 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp3P28862 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp3P28862 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.26■□□□□ 0.35
Mmp3P28862 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp3P28862 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp3P28862 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp3P28862 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp3P28862 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp3P28862 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp3P28862 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp3P28862 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp3P28862 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp3P28862 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Mmp3P28862 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.25■□□□□ 0.35
Mmp3P28862 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.25■□□□□ 0.35
Mmp3P28862 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp3P28862 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.25■□□□□ 0.35
Mmp3P28862 Gm5364-201ENSMUST00000216789 889 ntBASIC17.25■□□□□ 0.35
Mmp3P28862 Gm18622-201ENSMUST00000219361 595 ntBASIC17.25■□□□□ 0.35
Mmp3P28862 AV026068-213ENSMUST00000223675 1171 ntBASIC17.25■□□□□ 0.35
Mmp3P28862 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp3P28862 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp3P28862 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Mmp3P28862 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Mmp3P28862 Gm15590-201ENSMUST00000078419 552 ntBASIC17.25■□□□□ 0.35
Mmp3P28862 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp3P28862 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp3P28862 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp3P28862 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp3P28862 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp3P28862 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp3P28862 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp3P28862 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp3P28862 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp3P28862 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp3P28862 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Mmp3P28862 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp3P28862 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Mmp3P28862 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp3P28862 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Mmp3P28862 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.24■□□□□ 0.35
Mmp3P28862 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.24■□□□□ 0.35
Mmp3P28862 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp3P28862 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.24■□□□□ 0.35
Mmp3P28862 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp3P28862 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp3P28862 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp3P28862 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp3P28862 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp3P28862 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.24■□□□□ 0.35
Mmp3P28862 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp3P28862 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp3P28862 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp3P28862 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Mmp3P28862 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp3P28862 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Mmp3P28862 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp3P28862 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.23■□□□□ 0.35
Mmp3P28862 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.23■□□□□ 0.35
Mmp3P28862 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.23■□□□□ 0.35
Mmp3P28862 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.23■□□□□ 0.35
Mmp3P28862 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.23■□□□□ 0.35
Mmp3P28862 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.23■□□□□ 0.35
Mmp3P28862 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.23■□□□□ 0.35
Mmp3P28862 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.23■□□□□ 0.35
Mmp3P28862 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.23■□□□□ 0.35
Mmp3P28862 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.23■□□□□ 0.35
Mmp3P28862 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp3P28862 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.23■□□□□ 0.35
Mmp3P28862 Gm8825-201ENSMUST00000182565 998 ntBASIC17.23■□□□□ 0.35
Mmp3P28862 Gm4518-201ENSMUST00000182638 718 ntBASIC17.23■□□□□ 0.35
Mmp3P28862 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.23■□□□□ 0.35
Mmp3P28862 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.23■□□□□ 0.35
Mmp3P28862 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms