Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Irf8P23611 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Irf8P23611 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.44■□□□□ 0.38
Irf8P23611 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.44■□□□□ 0.38
Irf8P23611 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Irf8P23611 Gm15372-201ENSMUST00000120729 834 ntBASIC17.44■□□□□ 0.38
Irf8P23611 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Irf8P23611 Gm21362-201ENSMUST00000194272 928 ntBASIC17.44■□□□□ 0.38
Irf8P23611 Gm44454-201ENSMUST00000198541 138 ntBASIC17.44■□□□□ 0.38
Irf8P23611 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.44■□□□□ 0.38
Irf8P23611 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Irf8P23611 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Irf8P23611 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Irf8P23611 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Irf8P23611 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Irf8P23611 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Irf8P23611 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Irf8P23611 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Irf8P23611 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Irf8P23611 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Irf8P23611 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Irf8P23611 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Irf8P23611 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf8P23611 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf8P23611 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf8P23611 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf8P23611 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.43■□□□□ 0.38
Irf8P23611 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf8P23611 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf8P23611 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf8P23611 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Irf8P23611 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.43■□□□□ 0.38
Irf8P23611 Gm17807-201ENSMUST00000186869 298 ntBASIC17.43■□□□□ 0.38
Irf8P23611 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf8P23611 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.43■□□□□ 0.38
Irf8P23611 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.43■□□□□ 0.38
Irf8P23611 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf8P23611 Gm7367-201ENSMUST00000057611 492 ntBASIC17.43■□□□□ 0.38
Irf8P23611 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf8P23611 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Irf8P23611 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Irf8P23611 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf8P23611 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Irf8P23611 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Irf8P23611 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf8P23611 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.42■□□□□ 0.38
Irf8P23611 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf8P23611 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf8P23611 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf8P23611 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf8P23611 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf8P23611 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Irf8P23611 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf8P23611 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf8P23611 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Irf8P23611 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Irf8P23611 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Irf8P23611 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Irf8P23611 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf8P23611 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf8P23611 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf8P23611 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf8P23611 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf8P23611 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf8P23611 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.42■□□□□ 0.38
Irf8P23611 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf8P23611 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Irf8P23611 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Irf8P23611 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Irf8P23611 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Irf8P23611 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Irf8P23611 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Irf8P23611 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.41■□□□□ 0.38
Irf8P23611 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Irf8P23611 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Irf8P23611 Ank2-226ENSMUST00000189368 339 ntBASIC17.41■□□□□ 0.38
Irf8P23611 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Irf8P23611 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Irf8P23611 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Irf8P23611 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Irf8P23611 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Irf8P23611 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Irf8P23611 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Irf8P23611 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Irf8P23611 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Irf8P23611 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Irf8P23611 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Irf8P23611 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Irf8P23611 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Irf8P23611 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Irf8P23611 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.4■□□□□ 0.38
Irf8P23611 Gm18669-201ENSMUST00000216049 778 ntBASIC17.4■□□□□ 0.38
Irf8P23611 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.4■□□□□ 0.38
Irf8P23611 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.4■□□□□ 0.38
Irf8P23611 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Irf8P23611 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Irf8P23611 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Irf8P23611 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.4■□□□□ 0.38
Irf8P23611 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Irf8P23611 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms