Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Usp53P15975 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp53P15975 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp53P15975 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp53P15975 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp53P15975 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp53P15975 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp53P15975 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp53P15975 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp53P15975 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Usp53P15975 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Usp53P15975 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp53P15975 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.66■□□□□ 0.58
Usp53P15975 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Usp53P15975 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp53P15975 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.66■□□□□ 0.58
Usp53P15975 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Usp53P15975 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Usp53P15975 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.66■□□□□ 0.58
Usp53P15975 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Usp53P15975 Gm44771-201ENSMUST00000206975 626 ntBASIC18.66■□□□□ 0.58
Usp53P15975 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp53P15975 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp53P15975 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Usp53P15975 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp53P15975 Rps4l-201ENSMUST00000071745 943 ntBASIC18.66■□□□□ 0.58
Usp53P15975 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Usp53P15975 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp53P15975 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp53P15975 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.66■□□□□ 0.58
Usp53P15975 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp53P15975 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp53P15975 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Usp53P15975 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp53P15975 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Usp53P15975 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp53P15975 Gm25406-201ENSMUST00000157599 105 ntBASIC18.65■□□□□ 0.58
Usp53P15975 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.65■□□□□ 0.58
Usp53P15975 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.65■□□□□ 0.58
Usp53P15975 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp53P15975 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp53P15975 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.65■□□□□ 0.58
Usp53P15975 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp53P15975 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp53P15975 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.65■□□□□ 0.58
Usp53P15975 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp53P15975 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp53P15975 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp53P15975 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp53P15975 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp53P15975 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp53P15975 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Usp53P15975 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp53P15975 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp53P15975 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Usp53P15975 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp53P15975 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp53P15975 Gm4459-201ENSMUST00000118750 468 ntBASIC18.64■□□□□ 0.57
Usp53P15975 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp53P15975 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp53P15975 Mir6404-201ENSMUST00000183699 94 ntBASIC18.64■□□□□ 0.57
Usp53P15975 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.64■□□□□ 0.57
Usp53P15975 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Usp53P15975 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.64■□□□□ 0.57
Usp53P15975 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp53P15975 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp53P15975 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Usp53P15975 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp53P15975 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp53P15975 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp53P15975 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp53P15975 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp53P15975 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp53P15975 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Usp53P15975 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp53P15975 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp53P15975 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp53P15975 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp53P15975 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp53P15975 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Usp53P15975 Gm7862-201ENSMUST00000121461 292 ntBASIC18.63■□□□□ 0.57
Usp53P15975 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp53P15975 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Usp53P15975 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp53P15975 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp53P15975 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.63■□□□□ 0.57
Usp53P15975 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp53P15975 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.63■□□□□ 0.57
Usp53P15975 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp53P15975 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Usp53P15975 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Usp53P15975 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp53P15975 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp53P15975 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp53P15975 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.62■□□□□ 0.57
Usp53P15975 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp53P15975 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp53P15975 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp53P15975 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp53P15975 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms