Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RaraP11416 Mir5130-201ENSMUST00000175160 84 ntBASIC17.5■□□□□ 0.39
RaraP11416 Gm7889-201ENSMUST00000185591 958 ntBASIC17.5■□□□□ 0.39
RaraP11416 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RaraP11416 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RaraP11416 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RaraP11416 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RaraP11416 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RaraP11416 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RaraP11416 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RaraP11416 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RaraP11416 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.49■□□□□ 0.39
RaraP11416 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.49■□□□□ 0.39
RaraP11416 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.49■□□□□ 0.39
RaraP11416 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RaraP11416 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.49■□□□□ 0.39
RaraP11416 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.49■□□□□ 0.39
RaraP11416 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RaraP11416 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.48■□□□□ 0.39
RaraP11416 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.48■□□□□ 0.39
RaraP11416 Gm43799-201ENSMUST00000201845 579 ntBASIC17.48■□□□□ 0.39
RaraP11416 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RaraP11416 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.48■□□□□ 0.39
RaraP11416 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RaraP11416 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.48■□□□□ 0.39
RaraP11416 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.48■□□□□ 0.39
RaraP11416 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
RaraP11416 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RaraP11416 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RaraP11416 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RaraP11416 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RaraP11416 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RaraP11416 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RaraP11416 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RaraP11416 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RaraP11416 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RaraP11416 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RaraP11416 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RaraP11416 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RaraP11416 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RaraP11416 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RaraP11416 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RaraP11416 Gm45058-201ENSMUST00000205810 766 ntBASIC17.47■□□□□ 0.39
RaraP11416 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RaraP11416 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RaraP11416 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RaraP11416 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RaraP11416 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RaraP11416 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RaraP11416 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RaraP11416 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RaraP11416 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RaraP11416 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RaraP11416 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RaraP11416 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RaraP11416 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RaraP11416 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RaraP11416 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms