Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl3P10855 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl3P10855 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl3P10855 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl3P10855 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl3P10855 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl3P10855 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl3P10855 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.25□□□□□ -0.13
Ccl3P10855 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl3P10855 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl3P10855 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.25□□□□□ -0.13
Ccl3P10855 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.25□□□□□ -0.13
Ccl3P10855 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Ccl3P10855 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccl3P10855 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl3P10855 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccl3P10855 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.25□□□□□ -0.13
Ccl3P10855 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.25□□□□□ -0.13
Ccl3P10855 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl3P10855 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl3P10855 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
Ccl3P10855 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl3P10855 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl3P10855 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl3P10855 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl3P10855 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl3P10855 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl3P10855 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl3P10855 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl3P10855 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccl3P10855 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccl3P10855 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccl3P10855 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl3P10855 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ccl3P10855 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl3P10855 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl3P10855 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl3P10855 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl3P10855 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.24□□□□□ -0.13
Ccl3P10855 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl3P10855 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccl3P10855 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl3P10855 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl3P10855 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccl3P10855 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.24□□□□□ -0.13
Ccl3P10855 Mir8117-201ENSMUST00000184773 107 ntBASIC14.24□□□□□ -0.13
Ccl3P10855 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccl3P10855 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.24□□□□□ -0.13
Ccl3P10855 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl3P10855 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl3P10855 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl3P10855 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.24□□□□□ -0.13
Ccl3P10855 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccl3P10855 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl3P10855 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccl3P10855 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccl3P10855 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl3P10855 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl3P10855 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.24□□□□□ -0.13
Ccl3P10855 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl3P10855 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccl3P10855 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl3P10855 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl3P10855 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl3P10855 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl3P10855 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl3P10855 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl3P10855 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Ccl3P10855 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl3P10855 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccl3P10855 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.23□□□□□ -0.13
Ccl3P10855 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl3P10855 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl3P10855 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl3P10855 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl3P10855 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.23□□□□□ -0.13
Ccl3P10855 Gm26308-201ENSMUST00000157768 69 ntBASIC14.23□□□□□ -0.13
Ccl3P10855 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.23□□□□□ -0.13
Ccl3P10855 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl3P10855 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.23□□□□□ -0.13
Ccl3P10855 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl3P10855 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl3P10855 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl3P10855 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl3P10855 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl3P10855 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl3P10855 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccl3P10855 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccl3P10855 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl3P10855 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl3P10855 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.22□□□□□ -0.13
Ccl3P10855 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl3P10855 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl3P10855 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.22□□□□□ -0.13
Ccl3P10855 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccl3P10855 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl3P10855 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Ccl3P10855 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl3P10855 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl3P10855 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms