Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smim1P0C8K7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.2□□□□□ -0.62
Smim1P0C8K7 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smim1P0C8K7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Smim1P0C8K7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Wdr70-203ENSMUST00000227371 1130 ntBASIC11.19□□□□□ -0.62
Smim1P0C8K7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC11.19□□□□□ -0.62
Smim1P0C8K7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Gm10655-201ENSMUST00000098658 1397 ntBASIC11.18□□□□□ -0.62
Smim1P0C8K7 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Gm11643-201ENSMUST00000119578 864 ntBASIC11.18□□□□□ -0.62
Smim1P0C8K7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Smim1P0C8K7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.17□□□□□ -0.62
Smim1P0C8K7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Gm29241-201ENSMUST00000189260 1096 ntBASIC11.17□□□□□ -0.62
Smim1P0C8K7 Gm40848-201ENSMUST00000221998 324 ntBASIC11.17□□□□□ -0.62
Smim1P0C8K7 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim1P0C8K7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC11.17□□□□□ -0.62
Smim1P0C8K7 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Smim1P0C8K7 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms