Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06320 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06320 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC10.26□□□□□ -0.77
P06320 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P06320 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06320 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06320 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06320 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06320 Wnt10b-206ENSMUST00000228546 2709 ntBASIC10.26□□□□□ -0.77
P06320 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P06320 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P06320 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
P06320 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P06320 Gm11927-201ENSMUST00000118472 759 ntBASIC10.26□□□□□ -0.77
P06320 Gm6211-202ENSMUST00000167849 925 ntBASIC10.26□□□□□ -0.77
P06320 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC10.26□□□□□ -0.77
P06320 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC10.26□□□□□ -0.77
P06320 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06320 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06320 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06320 AL590614.2-201ENSMUST00000225374 1937 ntBASIC10.26□□□□□ -0.77
P06320 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
P06320 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06320 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC10.26□□□□□ -0.77
P06320 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
P06320 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
P06320 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06320 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06320 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P06320 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC10.26□□□□□ -0.77
P06320 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06320 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06320 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P06320 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC10.25□□□□□ -0.77
P06320 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
P06320 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
P06320 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
P06320 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
P06320 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC10.25□□□□□ -0.77
P06320 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC10.25□□□□□ -0.77
P06320 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
P06320 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Mtag2-201ENSMUST00000058665 714 ntBASIC10.25□□□□□ -0.77
P06320 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
P06320 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC10.25□□□□□ -0.77
P06320 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
P06320 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
P06320 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
P06320 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC10.25□□□□□ -0.77
P06320 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC10.25□□□□□ -0.77
P06320 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P06320 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC10.24□□□□□ -0.77
P06320 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06320 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
P06320 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06320 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P06320 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06320 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06320 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
P06320 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC10.24□□□□□ -0.77
P06320 Gm7290-201ENSMUST00000104990 617 ntBASIC10.24□□□□□ -0.77
P06320 Gm12918-201ENSMUST00000120234 636 ntBASIC10.24□□□□□ -0.77
P06320 Gm15710-201ENSMUST00000121821 636 ntBASIC10.24□□□□□ -0.77
P06320 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC10.24□□□□□ -0.77
P06320 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P06320 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
P06320 Gm5075-201ENSMUST00000196916 622 ntBASIC10.24□□□□□ -0.77
P06320 Gm10033-202ENSMUST00000211874 928 ntBASIC10.24□□□□□ -0.77
P06320 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
P06320 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC10.24□□□□□ -0.77
P06320 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC10.24□□□□□ -0.77
P06320 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC10.24□□□□□ -0.77
P06320 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms