Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Il3ra-202ENSMUST00000223589 738 ntBASIC13.55□□□□□ -0.24
CfdP03953 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CfdP03953 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CfdP03953 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CfdP03953 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CfdP03953 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CfdP03953 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CfdP03953 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CfdP03953 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CfdP03953 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.55□□□□□ -0.24
CfdP03953 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CfdP03953 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CfdP03953 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CfdP03953 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CfdP03953 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CfdP03953 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CfdP03953 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CfdP03953 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CfdP03953 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CfdP03953 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.54□□□□□ -0.24
CfdP03953 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CfdP03953 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CfdP03953 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CfdP03953 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CfdP03953 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CfdP03953 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CfdP03953 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
CfdP03953 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CfdP03953 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CfdP03953 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.54□□□□□ -0.24
CfdP03953 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CfdP03953 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.54□□□□□ -0.24
CfdP03953 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CfdP03953 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.54□□□□□ -0.24
CfdP03953 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CfdP03953 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.54□□□□□ -0.24
CfdP03953 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CfdP03953 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CfdP03953 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CfdP03953 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CfdP03953 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CfdP03953 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CfdP03953 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CfdP03953 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CfdP03953 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CfdP03953 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CfdP03953 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CfdP03953 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.53□□□□□ -0.24
CfdP03953 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.53□□□□□ -0.24
CfdP03953 Gm7638-201ENSMUST00000121348 967 ntBASIC13.53□□□□□ -0.24
CfdP03953 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Gm27405-201ENSMUST00000184201 112 ntBASIC13.53□□□□□ -0.24
CfdP03953 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.53□□□□□ -0.24
CfdP03953 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CfdP03953 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.53□□□□□ -0.24
CfdP03953 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CfdP03953 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CfdP03953 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CfdP03953 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.52□□□□□ -0.24
CfdP03953 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CfdP03953 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CfdP03953 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.52□□□□□ -0.24
CfdP03953 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.52□□□□□ -0.24
CfdP03953 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.52□□□□□ -0.24
CfdP03953 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CfdP03953 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.52□□□□□ -0.25
CfdP03953 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CfdP03953 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CfdP03953 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.52□□□□□ -0.25
CfdP03953 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.52□□□□□ -0.25
CfdP03953 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CfdP03953 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CfdP03953 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CfdP03953 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.52□□□□□ -0.25
CfdP03953 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.52□□□□□ -0.25
CfdP03953 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms