Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Col4a1P02463 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a1P02463 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a1P02463 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Col4a1P02463 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a1P02463 Auts2-212ENSMUST00000178555 309 ntBASIC19.76■□□□□ 0.75
Col4a1P02463 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a1P02463 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC19.76■□□□□ 0.75
Col4a1P02463 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a1P02463 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a1P02463 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a1P02463 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a1P02463 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.76■□□□□ 0.75
Col4a1P02463 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a1P02463 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Col4a1P02463 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a1P02463 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Col4a1P02463 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.75■□□□□ 0.75
Col4a1P02463 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC19.75■□□□□ 0.75
Col4a1P02463 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC19.75■□□□□ 0.75
Col4a1P02463 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Col4a1P02463 Gm5253-201ENSMUST00000187104 1025 ntBASIC19.75■□□□□ 0.75
Col4a1P02463 AC122024.2-201ENSMUST00000220086 871 ntBASIC19.75■□□□□ 0.75
Col4a1P02463 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.75■□□□□ 0.75
Col4a1P02463 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a1P02463 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a1P02463 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a1P02463 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a1P02463 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a1P02463 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Col4a1P02463 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a1P02463 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Col4a1P02463 Gm15358-201ENSMUST00000119249 520 ntBASIC19.75■□□□□ 0.75
Col4a1P02463 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a1P02463 Gm6257-201ENSMUST00000163864 910 ntBASIC19.75■□□□□ 0.75
Col4a1P02463 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a1P02463 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.74■□□□□ 0.75
Col4a1P02463 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a1P02463 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a1P02463 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a1P02463 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a1P02463 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Col4a1P02463 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a1P02463 AC119177.1-201ENSMUST00000227647 1332 ntBASIC19.74■□□□□ 0.75
Col4a1P02463 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a1P02463 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a1P02463 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a1P02463 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Col4a1P02463 Gm44492-201ENSMUST00000197012 141 ntBASIC19.74■□□□□ 0.75
Col4a1P02463 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Col4a1P02463 Gm45747-201ENSMUST00000212203 999 ntBASIC19.74■□□□□ 0.75
Col4a1P02463 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a1P02463 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a1P02463 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a1P02463 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a1P02463 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a1P02463 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a1P02463 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a1P02463 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.73■□□□□ 0.75
Col4a1P02463 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC19.73■□□□□ 0.75
Col4a1P02463 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.73■□□□□ 0.75
Col4a1P02463 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.73■□□□□ 0.75
Col4a1P02463 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a1P02463 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a1P02463 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a1P02463 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a1P02463 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a1P02463 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a1P02463 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a1P02463 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Col4a1P02463 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Col4a1P02463 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a1P02463 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.72■□□□□ 0.75
Col4a1P02463 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC19.72■□□□□ 0.75
Col4a1P02463 Gm5177-201ENSMUST00000183092 997 ntBASIC19.72■□□□□ 0.75
Col4a1P02463 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19.72■□□□□ 0.75
Col4a1P02463 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a1P02463 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Col4a1P02463 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a1P02463 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a1P02463 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a1P02463 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a1P02463 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a1P02463 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a1P02463 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a1P02463 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC19.71■□□□□ 0.75
Col4a1P02463 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a1P02463 Ndufaf2-202ENSMUST00000223734 556 ntBASIC19.71■□□□□ 0.75
Col4a1P02463 AC154572.2-201ENSMUST00000225105 997 ntBASIC19.71■□□□□ 0.75
Col4a1P02463 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a1P02463 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a1P02463 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a1P02463 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a1P02463 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a1P02463 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Col4a1P02463 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a1P02463 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a1P02463 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a1P02463 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC19.71■□□□□ 0.75
Col4a1P02463 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms