Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Gm11780-201ENSMUST00000136880 516 ntBASIC19.68■□□□□ 0.74
Setdb1O88974 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Setdb1O88974 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Setdb1O88974 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Setdb1O88974 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Setdb1O88974 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Setdb1O88974 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Setdb1O88974 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Setdb1O88974 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Setdb1O88974 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Setdb1O88974 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Setdb1O88974 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Setdb1O88974 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Setdb1O88974 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Setdb1O88974 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Setdb1O88974 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Setdb1O88974 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Setdb1O88974 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.67■□□□□ 0.74
Setdb1O88974 AC159114.1-201ENSMUST00000220349 266 ntBASIC19.67■□□□□ 0.74
Setdb1O88974 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Setdb1O88974 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Setdb1O88974 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Setdb1O88974 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Setdb1O88974 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Setdb1O88974 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Setdb1O88974 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Setdb1O88974 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Setdb1O88974 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Setdb1O88974 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Setdb1O88974 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Setdb1O88974 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Setdb1O88974 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Setdb1O88974 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Setdb1O88974 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Setdb1O88974 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Setdb1O88974 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Setdb1O88974 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.66■□□□□ 0.74
Setdb1O88974 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.66■□□□□ 0.74
Setdb1O88974 Gm27321-201ENSMUST00000185021 205 ntBASIC19.66■□□□□ 0.74
Setdb1O88974 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Setdb1O88974 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.66■□□□□ 0.74
Setdb1O88974 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Setdb1O88974 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Setdb1O88974 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Setdb1O88974 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Setdb1O88974 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Setdb1O88974 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Setdb1O88974 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Setdb1O88974 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Setdb1O88974 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Setdb1O88974 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Setdb1O88974 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.65■□□□□ 0.74
Setdb1O88974 Mir3113-201ENSMUST00000175478 76 ntBASIC19.65■□□□□ 0.74
Setdb1O88974 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC19.65■□□□□ 0.74
Setdb1O88974 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.65■□□□□ 0.74
Setdb1O88974 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Setdb1O88974 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Setdb1O88974 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Setdb1O88974 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Setdb1O88974 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Setdb1O88974 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Setdb1O88974 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Setdb1O88974 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Setdb1O88974 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.64■□□□□ 0.74
Setdb1O88974 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Setdb1O88974 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Setdb1O88974 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Setdb1O88974 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.64■□□□□ 0.73
Setdb1O88974 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Setdb1O88974 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC19.64■□□□□ 0.73
Setdb1O88974 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Setdb1O88974 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Setdb1O88974 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Setdb1O88974 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Setdb1O88974 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Setdb1O88974 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Setdb1O88974 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Setdb1O88974 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Setdb1O88974 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Setdb1O88974 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Setdb1O88974 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Setdb1O88974 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Setdb1O88974 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Setdb1O88974 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Setdb1O88974 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Setdb1O88974 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Setdb1O88974 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.63■□□□□ 0.73
Setdb1O88974 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.63■□□□□ 0.73
Setdb1O88974 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Setdb1O88974 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Setdb1O88974 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Setdb1O88974 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Setdb1O88974 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.63■□□□□ 0.73
Setdb1O88974 Gm15500-202ENSMUST00000071641 1019 ntBASIC19.63■□□□□ 0.73
Setdb1O88974 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Setdb1O88974 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Setdb1O88974 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Setdb1O88974 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Setdb1O88974 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Setdb1O88974 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms