Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc28a2O88627 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc28a2O88627 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc28a2O88627 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc28a2O88627 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc28a2O88627 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc28a2O88627 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc28a2O88627 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc28a2O88627 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Slc28a2O88627 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc28a2O88627 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc28a2O88627 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Slc28a2O88627 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc28a2O88627 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc28a2O88627 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc28a2O88627 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc28a2O88627 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc28a2O88627 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc28a2O88627 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc28a2O88627 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.39□□□□□ -0.11
Slc28a2O88627 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Slc28a2O88627 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc28a2O88627 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Slc28a2O88627 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc28a2O88627 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.39□□□□□ -0.11
Slc28a2O88627 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.39□□□□□ -0.11
Slc28a2O88627 Gm2274-201ENSMUST00000184539 609 ntBASIC14.39□□□□□ -0.11
Slc28a2O88627 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc28a2O88627 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc28a2O88627 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc28a2O88627 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Slc28a2O88627 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc28a2O88627 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc28a2O88627 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Slc28a2O88627 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Slc28a2O88627 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.39□□□□□ -0.11
Slc28a2O88627 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc28a2O88627 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Slc28a2O88627 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc28a2O88627 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Slc28a2O88627 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Slc28a2O88627 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Slc28a2O88627 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc28a2O88627 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc28a2O88627 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc28a2O88627 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc28a2O88627 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc28a2O88627 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc28a2O88627 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc28a2O88627 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc28a2O88627 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Slc28a2O88627 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc28a2O88627 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc28a2O88627 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc28a2O88627 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc28a2O88627 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Slc28a2O88627 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc28a2O88627 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc28a2O88627 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Slc28a2O88627 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc28a2O88627 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Slc28a2O88627 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc28a2O88627 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc28a2O88627 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc28a2O88627 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc28a2O88627 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc28a2O88627 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc28a2O88627 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc28a2O88627 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Slc28a2O88627 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc28a2O88627 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Slc28a2O88627 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc28a2O88627 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc28a2O88627 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc28a2O88627 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.37□□□□□ -0.11
Slc28a2O88627 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.37□□□□□ -0.11
Slc28a2O88627 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc28a2O88627 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc28a2O88627 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc28a2O88627 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc28a2O88627 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
Slc28a2O88627 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Slc28a2O88627 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc28a2O88627 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Slc28a2O88627 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc28a2O88627 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc28a2O88627 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc28a2O88627 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Slc28a2O88627 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc28a2O88627 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc28a2O88627 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Slc28a2O88627 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Slc28a2O88627 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slc28a2O88627 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Slc28a2O88627 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc28a2O88627 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slc28a2O88627 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc28a2O88627 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Slc28a2O88627 Gm13474-201ENSMUST00000122466 815 ntBASIC14.36□□□□□ -0.11
Slc28a2O88627 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms