Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.84□□□□□ -0.19
Cldn1O88551 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.84□□□□□ -0.19
Cldn1O88551 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Gm24513-201ENSMUST00000174964 138 ntBASIC13.84□□□□□ -0.19
Cldn1O88551 Gm10576-201ENSMUST00000191927 825 ntBASIC13.84□□□□□ -0.19
Cldn1O88551 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.84□□□□□ -0.19
Cldn1O88551 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.84□□□□□ -0.19
Cldn1O88551 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.84□□□□□ -0.19
Cldn1O88551 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Cldn1O88551 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cldn1O88551 Gm15590-201ENSMUST00000078419 552 ntBASIC13.84□□□□□ -0.19
Cldn1O88551 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cldn1O88551 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.84□□□□□ -0.19
Cldn1O88551 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Cldn1O88551 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cldn1O88551 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cldn1O88551 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cldn1O88551 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cldn1O88551 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cldn1O88551 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn1O88551 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn1O88551 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.83□□□□□ -0.2
Cldn1O88551 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn1O88551 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn1O88551 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.83□□□□□ -0.2
Cldn1O88551 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn1O88551 Gm15173-201ENSMUST00000122049 433 ntBASIC13.83□□□□□ -0.2
Cldn1O88551 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.83□□□□□ -0.2
Cldn1O88551 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn1O88551 Gm27397-201ENSMUST00000184997 107 ntBASIC13.83□□□□□ -0.2
Cldn1O88551 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.83□□□□□ -0.2
Cldn1O88551 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.83□□□□□ -0.2
Cldn1O88551 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.83□□□□□ -0.2
Cldn1O88551 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn1O88551 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Cldn1O88551 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Cldn1O88551 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn1O88551 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn1O88551 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cldn1O88551 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cldn1O88551 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn1O88551 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn1O88551 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn1O88551 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cldn1O88551 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn1O88551 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn1O88551 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn1O88551 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn1O88551 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn1O88551 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn1O88551 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cldn1O88551 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.82□□□□□ -0.2
Cldn1O88551 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cldn1O88551 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.82□□□□□ -0.2
Cldn1O88551 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.82□□□□□ -0.2
Cldn1O88551 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.82□□□□□ -0.2
Cldn1O88551 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.82□□□□□ -0.2
Cldn1O88551 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.82□□□□□ -0.2
Cldn1O88551 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cldn1O88551 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cldn1O88551 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms