Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cops3O88543 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops3O88543 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cops3O88543 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.5□□□□□ -0.09
Cops3O88543 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.5□□□□□ -0.09
Cops3O88543 Gm21814-202ENSMUST00000203277 873 ntBASIC14.5□□□□□ -0.09
Cops3O88543 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops3O88543 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops3O88543 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.5□□□□□ -0.09
Cops3O88543 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cops3O88543 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cops3O88543 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops3O88543 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops3O88543 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops3O88543 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops3O88543 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops3O88543 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cops3O88543 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.5□□□□□ -0.09
Cops3O88543 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cops3O88543 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cops3O88543 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cops3O88543 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cops3O88543 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cops3O88543 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cops3O88543 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops3O88543 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cops3O88543 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops3O88543 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops3O88543 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops3O88543 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Cops3O88543 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
Cops3O88543 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cops3O88543 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.49□□□□□ -0.09
Cops3O88543 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.49□□□□□ -0.09
Cops3O88543 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.49□□□□□ -0.09
Cops3O88543 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.49□□□□□ -0.09
Cops3O88543 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Cops3O88543 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cops3O88543 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.49□□□□□ -0.09
Cops3O88543 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops3O88543 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops3O88543 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cops3O88543 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops3O88543 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Cops3O88543 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cops3O88543 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops3O88543 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops3O88543 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops3O88543 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cops3O88543 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cops3O88543 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops3O88543 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cops3O88543 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Cops3O88543 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops3O88543 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops3O88543 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cops3O88543 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops3O88543 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.48□□□□□ -0.09
Cops3O88543 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops3O88543 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.48□□□□□ -0.09
Cops3O88543 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Cops3O88543 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops3O88543 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.48□□□□□ -0.09
Cops3O88543 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cops3O88543 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.48□□□□□ -0.09
Cops3O88543 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.48□□□□□ -0.09
Cops3O88543 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.48□□□□□ -0.09
Cops3O88543 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.48□□□□□ -0.09
Cops3O88543 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops3O88543 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops3O88543 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cops3O88543 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.48□□□□□ -0.09
Cops3O88543 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops3O88543 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops3O88543 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops3O88543 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cops3O88543 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cops3O88543 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cops3O88543 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cops3O88543 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cops3O88543 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cops3O88543 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.47□□□□□ -0.09
Cops3O88543 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.47□□□□□ -0.09
Cops3O88543 Mir5122-201ENSMUST00000175004 89 ntBASIC14.47□□□□□ -0.09
Cops3O88543 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms