Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Gm10226O88253 Rps4l-201ENSMUST00000071745 943 ntBASIC12.44□□□□□ -0.42
Gm10226O88253 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm10226O88253 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm10226O88253 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm10226O88253 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm10226O88253 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm10226O88253 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm10226O88253 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm10226O88253 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm10226O88253 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Gm10226O88253 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Gm10226O88253 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm10226O88253 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm10226O88253 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm10226O88253 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm10226O88253 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.43□□□□□ -0.42
Gm10226O88253 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Gm10226O88253 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Gm10226O88253 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Gm10226O88253 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.43□□□□□ -0.42
Gm10226O88253 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Gm10226O88253 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm10226O88253 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm10226O88253 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm10226O88253 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm10226O88253 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm10226O88253 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm10226O88253 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.43□□□□□ -0.42
Gm10226O88253 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Gm10226O88253 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Gm10226O88253 Gm4459-201ENSMUST00000118750 468 ntBASIC12.43□□□□□ -0.42
Gm10226O88253 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.43□□□□□ -0.42
Gm10226O88253 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Gm10226O88253 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Gm10226O88253 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm10226O88253 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm10226O88253 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Gm10226O88253 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm10226O88253 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm10226O88253 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm10226O88253 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm10226O88253 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm10226O88253 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm10226O88253 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm10226O88253 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm10226O88253 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm10226O88253 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm10226O88253 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm10226O88253 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm10226O88253 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm10226O88253 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm10226O88253 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm10226O88253 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.42□□□□□ -0.42
Gm10226O88253 Gm13884-201ENSMUST00000118103 829 ntBASIC12.42□□□□□ -0.42
Gm10226O88253 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.42□□□□□ -0.42
Gm10226O88253 Gm44357-201ENSMUST00000195897 142 ntBASIC12.42□□□□□ -0.42
Gm10226O88253 Gm19658-201ENSMUST00000196231 138 ntBASIC12.42□□□□□ -0.42
Gm10226O88253 Gm44367-201ENSMUST00000196836 138 ntBASIC12.42□□□□□ -0.42
Gm10226O88253 Gm44350-201ENSMUST00000197197 138 ntBASIC12.42□□□□□ -0.42
Gm10226O88253 Gm44390-201ENSMUST00000197533 144 ntBASIC12.42□□□□□ -0.42
Gm10226O88253 Gm44313-201ENSMUST00000198018 138 ntBASIC12.42□□□□□ -0.42
Gm10226O88253 Gm44486-201ENSMUST00000198508 138 ntBASIC12.42□□□□□ -0.42
Gm10226O88253 Gm44314-201ENSMUST00000199263 138 ntBASIC12.42□□□□□ -0.42
Gm10226O88253 Gm44394-201ENSMUST00000199558 138 ntBASIC12.42□□□□□ -0.42
Gm10226O88253 Gm44484-201ENSMUST00000199873 138 ntBASIC12.42□□□□□ -0.42
Gm10226O88253 Gm44466-201ENSMUST00000200264 138 ntBASIC12.42□□□□□ -0.42
Gm10226O88253 Gm44359-201ENSMUST00000200671 138 ntBASIC12.42□□□□□ -0.42
Gm10226O88253 Gm5864-201ENSMUST00000202263 970 ntBASIC12.42□□□□□ -0.42
Gm10226O88253 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.42□□□□□ -0.42
Gm10226O88253 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.42□□□□□ -0.42
Gm10226O88253 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.42□□□□□ -0.42
Gm10226O88253 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.42□□□□□ -0.42
Gm10226O88253 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Gm10226O88253 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm10226O88253 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm10226O88253 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gm10226O88253 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm10226O88253 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm10226O88253 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Gm10226O88253 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm10226O88253 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm10226O88253 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm10226O88253 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm10226O88253 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.42□□□□□ -0.42
Gm10226O88253 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm10226O88253 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm10226O88253 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm10226O88253 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.41□□□□□ -0.42
Gm10226O88253 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.41□□□□□ -0.42
Gm10226O88253 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm10226O88253 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
Gm10226O88253 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm10226O88253 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Gm10226O88253 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.41□□□□□ -0.42
Gm10226O88253 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.41□□□□□ -0.42
Gm10226O88253 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.41□□□□□ -0.42
Gm10226O88253 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Gm10226O88253 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Gm10226O88253 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms