Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ttc3O88196 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ttc3O88196 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
Ttc3O88196 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ttc3O88196 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Ttc3O88196 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ttc3O88196 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ttc3O88196 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ttc3O88196 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ttc3O88196 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ttc3O88196 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ttc3O88196 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ttc3O88196 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ttc3O88196 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ttc3O88196 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ttc3O88196 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ttc3O88196 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 Gm15467-201ENSMUST00000120582 445 ntBASIC16.86■□□□□ 0.29
Ttc3O88196 Gm9727-201ENSMUST00000161387 555 ntBASIC16.86■□□□□ 0.29
Ttc3O88196 Gm8000-201ENSMUST00000188378 592 ntBASIC16.86■□□□□ 0.29
Ttc3O88196 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ttc3O88196 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ttc3O88196 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.86■□□□□ 0.29
Ttc3O88196 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.86■□□□□ 0.29
Ttc3O88196 Gm8344-201ENSMUST00000119813 856 ntBASIC16.86■□□□□ 0.29
Ttc3O88196 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.86■□□□□ 0.29
Ttc3O88196 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.86■□□□□ 0.29
Ttc3O88196 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ttc3O88196 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ttc3O88196 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ttc3O88196 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ttc3O88196 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ttc3O88196 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ttc3O88196 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ttc3O88196 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ttc3O88196 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.85■□□□□ 0.29
Ttc3O88196 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ttc3O88196 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ttc3O88196 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ttc3O88196 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ttc3O88196 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ttc3O88196 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.85■□□□□ 0.29
Ttc3O88196 Gm14494-201ENSMUST00000118786 435 ntBASIC16.85■□□□□ 0.29
Ttc3O88196 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ttc3O88196 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ttc3O88196 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.85■□□□□ 0.29
Ttc3O88196 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ttc3O88196 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ttc3O88196 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ttc3O88196 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ttc3O88196 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ttc3O88196 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ttc3O88196 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ttc3O88196 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ttc3O88196 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ttc3O88196 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ttc3O88196 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ttc3O88196 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ttc3O88196 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ttc3O88196 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.84■□□□□ 0.29
Ttc3O88196 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Ttc3O88196 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ttc3O88196 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ttc3O88196 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ttc3O88196 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ttc3O88196 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ttc3O88196 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ttc3O88196 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
Ttc3O88196 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ttc3O88196 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ttc3O88196 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ttc3O88196 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ttc3O88196 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ttc3O88196 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ttc3O88196 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ttc3O88196 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.84■□□□□ 0.29
Ttc3O88196 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.84■□□□□ 0.29
Ttc3O88196 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.84■□□□□ 0.29
Ttc3O88196 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms