Protein–RNA interactions for Protein: O70309

Itgb5, Integrin beta-5, mousemouse

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb5O70309 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Itgb5O70309 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.87■□□□□ 0.45
Itgb5O70309 Gm18622-201ENSMUST00000219361 595 ntBASIC17.87■□□□□ 0.45
Itgb5O70309 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Itgb5O70309 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Itgb5O70309 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Itgb5O70309 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Itgb5O70309 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Itgb5O70309 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Itgb5O70309 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Itgb5O70309 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Itgb5O70309 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Itgb5O70309 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Itgb5O70309 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Itgb5O70309 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Itgb5O70309 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Itgb5O70309 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Itgb5O70309 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Itgb5O70309 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Itgb5O70309 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.86■□□□□ 0.45
Itgb5O70309 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.86■□□□□ 0.45
Itgb5O70309 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Itgb5O70309 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.86■□□□□ 0.45
Itgb5O70309 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.86■□□□□ 0.45
Itgb5O70309 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.86■□□□□ 0.45
Itgb5O70309 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.86■□□□□ 0.45
Itgb5O70309 Gm15173-201ENSMUST00000122049 433 ntBASIC17.86■□□□□ 0.45
Itgb5O70309 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.86■□□□□ 0.45
Itgb5O70309 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Itgb5O70309 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.86■□□□□ 0.45
Itgb5O70309 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.86■□□□□ 0.45
Itgb5O70309 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.86■□□□□ 0.45
Itgb5O70309 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.86■□□□□ 0.45
Itgb5O70309 Gm8825-201ENSMUST00000182565 998 ntBASIC17.86■□□□□ 0.45
Itgb5O70309 Gm4518-201ENSMUST00000182638 718 ntBASIC17.86■□□□□ 0.45
Itgb5O70309 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.86■□□□□ 0.45
Itgb5O70309 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.86■□□□□ 0.45
Itgb5O70309 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.86■□□□□ 0.45
Itgb5O70309 Gm43514-201ENSMUST00000198852 424 ntBASIC17.86■□□□□ 0.45
Itgb5O70309 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.86■□□□□ 0.45
Itgb5O70309 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Itgb5O70309 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Itgb5O70309 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.86■□□□□ 0.45
Itgb5O70309 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.86■□□□□ 0.45
Itgb5O70309 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Itgb5O70309 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.86■□□□□ 0.45
Itgb5O70309 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Itgb5O70309 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Itgb5O70309 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Itgb5O70309 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Itgb5O70309 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Itgb5O70309 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Itgb5O70309 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Itgb5O70309 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Itgb5O70309 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Itgb5O70309 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Itgb5O70309 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Itgb5O70309 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Itgb5O70309 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Itgb5O70309 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.85■□□□□ 0.45
Itgb5O70309 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Itgb5O70309 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Itgb5O70309 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Itgb5O70309 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.85■□□□□ 0.45
Itgb5O70309 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Itgb5O70309 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.85■□□□□ 0.45
Itgb5O70309 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Itgb5O70309 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Itgb5O70309 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Itgb5O70309 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Itgb5O70309 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Itgb5O70309 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Itgb5O70309 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Itgb5O70309 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Itgb5O70309 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Itgb5O70309 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Itgb5O70309 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Itgb5O70309 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Itgb5O70309 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Itgb5O70309 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Itgb5O70309 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Itgb5O70309 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Itgb5O70309 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.84■□□□□ 0.45
Itgb5O70309 Mir5126-201ENSMUST00000175513 77 ntBASIC17.84■□□□□ 0.45
Itgb5O70309 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.84■□□□□ 0.45
Itgb5O70309 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.84■□□□□ 0.45
Itgb5O70309 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Itgb5O70309 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Itgb5O70309 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Itgb5O70309 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Itgb5O70309 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Itgb5O70309 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Itgb5O70309 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Itgb5O70309 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Itgb5O70309 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Itgb5O70309 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Itgb5O70309 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.84■□□□□ 0.45
Itgb5O70309 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Itgb5O70309 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Itgb5O70309 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms