Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Gm25990-201ENSMUST00000102440 86 ntBASIC13.64□□□□□ -0.23
Cxcl13O55038 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.64□□□□□ -0.23
Cxcl13O55038 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Cxcl13O55038 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.64□□□□□ -0.23
Cxcl13O55038 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cxcl13O55038 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.64□□□□□ -0.23
Cxcl13O55038 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.64□□□□□ -0.23
Cxcl13O55038 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Cxcl13O55038 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cxcl13O55038 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cxcl13O55038 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.63□□□□□ -0.23
Cxcl13O55038 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.63□□□□□ -0.23
Cxcl13O55038 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cxcl13O55038 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.63□□□□□ -0.23
Cxcl13O55038 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.63□□□□□ -0.23
Cxcl13O55038 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Cxcl13O55038 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Cxcl13O55038 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.63□□□□□ -0.23
Cxcl13O55038 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.63□□□□□ -0.23
Cxcl13O55038 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cxcl13O55038 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cxcl13O55038 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.63□□□□□ -0.23
Cxcl13O55038 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cxcl13O55038 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cxcl13O55038 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
Cxcl13O55038 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl13O55038 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl13O55038 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl13O55038 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl13O55038 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl13O55038 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cxcl13O55038 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl13O55038 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl13O55038 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.62□□□□□ -0.23
Cxcl13O55038 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl13O55038 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl13O55038 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Cxcl13O55038 Gm13216-201ENSMUST00000117145 591 ntBASIC13.62□□□□□ -0.23
Cxcl13O55038 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl13O55038 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.62□□□□□ -0.23
Cxcl13O55038 AW822252-206ENSMUST00000208904 237 ntBASIC13.62□□□□□ -0.23
Cxcl13O55038 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.62□□□□□ -0.23
Cxcl13O55038 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.62□□□□□ -0.23
Cxcl13O55038 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl13O55038 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl13O55038 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl13O55038 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl13O55038 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl13O55038 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cxcl13O55038 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl13O55038 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cxcl13O55038 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cxcl13O55038 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.62□□□□□ -0.23
Cxcl13O55038 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Cxcl13O55038 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl13O55038 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Cxcl13O55038 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl13O55038 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cxcl13O55038 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms