Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Kcnu1O54982 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Kcnu1O54982 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Kcnu1O54982 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcnu1O54982 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcnu1O54982 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcnu1O54982 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Kcnu1O54982 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcnu1O54982 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcnu1O54982 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcnu1O54982 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Kcnu1O54982 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcnu1O54982 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Kcnu1O54982 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Kcnu1O54982 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Kcnu1O54982 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Kcnu1O54982 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Kcnu1O54982 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.23■□□□□ 0.35
Kcnu1O54982 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcnu1O54982 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcnu1O54982 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Kcnu1O54982 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcnu1O54982 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Kcnu1O54982 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.23■□□□□ 0.35
Kcnu1O54982 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcnu1O54982 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Kcnu1O54982 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.23■□□□□ 0.35
Kcnu1O54982 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcnu1O54982 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Kcnu1O54982 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcnu1O54982 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Kcnu1O54982 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Kcnu1O54982 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Kcnu1O54982 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Kcnu1O54982 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcnu1O54982 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Kcnu1O54982 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcnu1O54982 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcnu1O54982 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcnu1O54982 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Kcnu1O54982 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.22■□□□□ 0.35
Kcnu1O54982 Mir770-201ENSMUST00000103252 94 ntBASIC17.22■□□□□ 0.35
Kcnu1O54982 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.22■□□□□ 0.35
Kcnu1O54982 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.22■□□□□ 0.35
Kcnu1O54982 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcnu1O54982 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Kcnu1O54982 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcnu1O54982 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.22■□□□□ 0.35
Kcnu1O54982 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcnu1O54982 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcnu1O54982 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcnu1O54982 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcnu1O54982 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Kcnu1O54982 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Kcnu1O54982 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Kcnu1O54982 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcnu1O54982 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Kcnu1O54982 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Kcnu1O54982 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Kcnu1O54982 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcnu1O54982 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Kcnu1O54982 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcnu1O54982 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Kcnu1O54982 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcnu1O54982 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Kcnu1O54982 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcnu1O54982 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.21■□□□□ 0.35
Kcnu1O54982 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Kcnu1O54982 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcnu1O54982 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcnu1O54982 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcnu1O54982 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Kcnu1O54982 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Kcnu1O54982 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcnu1O54982 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcnu1O54982 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcnu1O54982 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcnu1O54982 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcnu1O54982 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Kcnu1O54982 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Kcnu1O54982 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.21■□□□□ 0.35
Kcnu1O54982 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Kcnu1O54982 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Kcnu1O54982 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Kcnu1O54982 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Kcnu1O54982 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Kcnu1O54982 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Kcnu1O54982 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Kcnu1O54982 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Kcnu1O54982 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Kcnu1O54982 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Kcnu1O54982 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Kcnu1O54982 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Kcnu1O54982 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Kcnu1O54982 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Kcnu1O54982 App-207ENSMUST00000227737 2827 ntBASIC17.2■□□□□ 0.34
Kcnu1O54982 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Kcnu1O54982 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.2■□□□□ 0.34
Kcnu1O54982 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Kcnu1O54982 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms