Protein–RNA interactions for Protein: O54907

Tnfsf12, Tumor necrosis factor ligand superfamily member 12, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf12O54907 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf12O54907 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf12O54907 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tnfsf12O54907 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf12O54907 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf12O54907 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfsf12O54907 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Mir1668-201ENSMUST00000184114 107 ntBASIC13.31□□□□□ -0.28
Tnfsf12O54907 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.31□□□□□ -0.28
Tnfsf12O54907 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.31□□□□□ -0.28
Tnfsf12O54907 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.3□□□□□ -0.28
Tnfsf12O54907 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Gm22697-201ENSMUST00000175194 63 ntBASIC13.3□□□□□ -0.28
Tnfsf12O54907 Gm44450-201ENSMUST00000199528 114 ntBASIC13.3□□□□□ -0.28
Tnfsf12O54907 Gm18421-201ENSMUST00000204122 625 ntBASIC13.3□□□□□ -0.28
Tnfsf12O54907 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.3□□□□□ -0.28
Tnfsf12O54907 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfsf12O54907 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf12O54907 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf12O54907 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf12O54907 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfsf12O54907 Dancr-204ENSMUST00000132389 2347 ntBASIC13.29□□□□□ -0.28
Tnfsf12O54907 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.29□□□□□ -0.28
Tnfsf12O54907 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms