Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Abca4O35600 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abca4O35600 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abca4O35600 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Abca4O35600 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abca4O35600 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abca4O35600 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abca4O35600 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Abca4O35600 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abca4O35600 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abca4O35600 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Abca4O35600 Thap2-203ENSMUST00000218989 527 ntBASIC15.14■□□□□ 0.01
Abca4O35600 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abca4O35600 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Abca4O35600 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abca4O35600 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Abca4O35600 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Abca4O35600 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Abca4O35600 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abca4O35600 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abca4O35600 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abca4O35600 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Abca4O35600 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Abca4O35600 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abca4O35600 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abca4O35600 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abca4O35600 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abca4O35600 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.13■□□□□ 0.01
Abca4O35600 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.13■□□□□ 0.01
Abca4O35600 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abca4O35600 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.13■□□□□ 0.01
Abca4O35600 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.13■□□□□ 0.01
Abca4O35600 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Abca4O35600 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abca4O35600 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abca4O35600 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Abca4O35600 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abca4O35600 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Abca4O35600 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca4O35600 Rpph1-201ENSMUST00000175096 319 ntBASIC15.12■□□□□ 0.01
Abca4O35600 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.12■□□□□ 0.01
Abca4O35600 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.12■□□□□ 0.01
Abca4O35600 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca4O35600 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Abca4O35600 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca4O35600 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Abca4O35600 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Abca4O35600 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca4O35600 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Abca4O35600 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca4O35600 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca4O35600 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.12■□□□□ 0.01
Abca4O35600 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Abca4O35600 Gm18057-201ENSMUST00000208220 503 ntBASIC15.12■□□□□ 0.01
Abca4O35600 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca4O35600 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca4O35600 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca4O35600 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Abca4O35600 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abca4O35600 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abca4O35600 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abca4O35600 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abca4O35600 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Abca4O35600 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.11■□□□□ 0.01
Abca4O35600 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.11■□□□□ 0.01
Abca4O35600 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.11■□□□□ 0.01
Abca4O35600 Gm18622-201ENSMUST00000219361 595 ntBASIC15.11■□□□□ 0.01
Abca4O35600 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Abca4O35600 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Abca4O35600 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abca4O35600 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abca4O35600 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Abca4O35600 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abca4O35600 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abca4O35600 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abca4O35600 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abca4O35600 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.11■□□□□ 0.01
Abca4O35600 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abca4O35600 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Abca4O35600 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Abca4O35600 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Abca4O35600 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abca4O35600 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abca4O35600 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abca4O35600 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Abca4O35600 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abca4O35600 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Abca4O35600 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.1■□□□□ 0.01
Abca4O35600 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.1■□□□□ 0.01
Abca4O35600 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Abca4O35600 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.1■□□□□ 0.01
Abca4O35600 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Abca4O35600 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abca4O35600 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.1■□□□□ 0.01
Abca4O35600 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abca4O35600 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abca4O35600 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.1■□□□□ 0.01
Abca4O35600 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abca4O35600 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abca4O35600 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms