Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Efnb3O35393 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Efnb3O35393 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Efnb3O35393 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Efnb3O35393 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Efnb3O35393 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.8□□□□□ -0.36
Efnb3O35393 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Efnb3O35393 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Efnb3O35393 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Efnb3O35393 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Efnb3O35393 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.8□□□□□ -0.36
Efnb3O35393 Il3ra-202ENSMUST00000223589 738 ntBASIC12.8□□□□□ -0.36
Efnb3O35393 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Efnb3O35393 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.8□□□□□ -0.36
Efnb3O35393 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Efnb3O35393 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Efnb3O35393 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Efnb3O35393 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Efnb3O35393 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Efnb3O35393 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Efnb3O35393 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Efnb3O35393 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Efnb3O35393 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Efnb3O35393 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Efnb3O35393 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Efnb3O35393 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Efnb3O35393 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Efnb3O35393 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Efnb3O35393 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Efnb3O35393 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.79□□□□□ -0.36
Efnb3O35393 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.79□□□□□ -0.36
Efnb3O35393 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Efnb3O35393 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Efnb3O35393 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Efnb3O35393 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.79□□□□□ -0.36
Efnb3O35393 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Efnb3O35393 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Efnb3O35393 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Efnb3O35393 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Efnb3O35393 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.78□□□□□ -0.36
Efnb3O35393 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Efnb3O35393 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Efnb3O35393 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Efnb3O35393 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Efnb3O35393 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Efnb3O35393 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.78□□□□□ -0.36
Efnb3O35393 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.78□□□□□ -0.36
Efnb3O35393 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Efnb3O35393 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Efnb3O35393 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Efnb3O35393 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Efnb3O35393 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Efnb3O35393 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Efnb3O35393 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.78□□□□□ -0.36
Efnb3O35393 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Efnb3O35393 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Efnb3O35393 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Efnb3O35393 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.78□□□□□ -0.36
Efnb3O35393 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Efnb3O35393 Gm7638-201ENSMUST00000121348 967 ntBASIC12.78□□□□□ -0.36
Efnb3O35393 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.78□□□□□ -0.36
Efnb3O35393 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Efnb3O35393 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
Efnb3O35393 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Efnb3O35393 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Efnb3O35393 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Efnb3O35393 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Efnb3O35393 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Efnb3O35393 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Efnb3O35393 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Efnb3O35393 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Efnb3O35393 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Efnb3O35393 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms