Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC20.63■□□□□ 0.89
Col15a1O35206 AC124549.3-201ENSMUST00000225541 367 ntBASIC20.63■□□□□ 0.89
Col15a1O35206 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col15a1O35206 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col15a1O35206 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col15a1O35206 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col15a1O35206 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col15a1O35206 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC20.63■□□□□ 0.89
Col15a1O35206 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col15a1O35206 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col15a1O35206 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col15a1O35206 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col15a1O35206 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.63■□□□□ 0.89
Col15a1O35206 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col15a1O35206 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Col15a1O35206 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col15a1O35206 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Col15a1O35206 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC20.62■□□□□ 0.89
Col15a1O35206 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col15a1O35206 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC20.62■□□□□ 0.89
Col15a1O35206 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC20.62■□□□□ 0.89
Col15a1O35206 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC20.62■□□□□ 0.89
Col15a1O35206 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col15a1O35206 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Col15a1O35206 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Col15a1O35206 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Col15a1O35206 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20.62■□□□□ 0.89
Col15a1O35206 Gm38318-201ENSMUST00000195769 1706 ntBASIC20.62■□□□□ 0.89
Col15a1O35206 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col15a1O35206 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col15a1O35206 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col15a1O35206 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col15a1O35206 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Col15a1O35206 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col15a1O35206 Gm15920-201ENSMUST00000118998 402 ntBASIC20.61■□□□□ 0.89
Col15a1O35206 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC20.61■□□□□ 0.89
Col15a1O35206 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col15a1O35206 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC20.61■□□□□ 0.89
Col15a1O35206 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC20.61■□□□□ 0.89
Col15a1O35206 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col15a1O35206 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col15a1O35206 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col15a1O35206 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col15a1O35206 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col15a1O35206 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC20.61■□□□□ 0.89
Col15a1O35206 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col15a1O35206 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Col15a1O35206 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col15a1O35206 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col15a1O35206 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col15a1O35206 Gm7063-201ENSMUST00000186840 981 ntBASIC20.6■□□□□ 0.89
Col15a1O35206 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Col15a1O35206 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col15a1O35206 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col15a1O35206 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Col15a1O35206 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col15a1O35206 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col15a1O35206 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.6■□□□□ 0.89
Col15a1O35206 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Col15a1O35206 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col15a1O35206 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col15a1O35206 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Col15a1O35206 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col15a1O35206 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col15a1O35206 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col15a1O35206 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC20.59■□□□□ 0.89
Col15a1O35206 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC20.59■□□□□ 0.89
Col15a1O35206 Gm8396-201ENSMUST00000057361 823 ntBASIC20.59■□□□□ 0.89
Col15a1O35206 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col15a1O35206 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col15a1O35206 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col15a1O35206 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.59■□□□□ 0.89
Col15a1O35206 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Col15a1O35206 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col15a1O35206 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Col15a1O35206 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col15a1O35206 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col15a1O35206 Gm18489-201ENSMUST00000172565 551 ntBASIC20.59■□□□□ 0.89
Col15a1O35206 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Col15a1O35206 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Col15a1O35206 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col15a1O35206 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Col15a1O35206 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col15a1O35206 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Col15a1O35206 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Col15a1O35206 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC20.58■□□□□ 0.89
Col15a1O35206 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col15a1O35206 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.58■□□□□ 0.88
Col15a1O35206 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col15a1O35206 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col15a1O35206 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Col15a1O35206 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col15a1O35206 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Col15a1O35206 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC20.58■□□□□ 0.88
Col15a1O35206 Gm14701-201ENSMUST00000117156 348 ntBASIC20.58■□□□□ 0.88
Col15a1O35206 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC20.58■□□□□ 0.88
Col15a1O35206 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col15a1O35206 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col15a1O35206 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC20.58■□□□□ 0.88
Col15a1O35206 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms