Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ercc2O08811 Olfr129-201ENSMUST00000122318 993 ntBASIC16.56■□□□□ 0.24
Ercc2O08811 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ercc2O08811 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.56■□□□□ 0.24
Ercc2O08811 Gm27742-201ENSMUST00000184667 60 ntBASIC16.56■□□□□ 0.24
Ercc2O08811 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ercc2O08811 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ercc2O08811 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ercc2O08811 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ercc2O08811 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ercc2O08811 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ercc2O08811 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ercc2O08811 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ercc2O08811 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.56■□□□□ 0.24
Ercc2O08811 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ercc2O08811 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ercc2O08811 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ercc2O08811 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ercc2O08811 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ercc2O08811 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ercc2O08811 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ercc2O08811 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ercc2O08811 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ercc2O08811 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ercc2O08811 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.55■□□□□ 0.24
Ercc2O08811 Gm7284-201ENSMUST00000131667 944 ntBASIC16.55■□□□□ 0.24
Ercc2O08811 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ercc2O08811 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ercc2O08811 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.55■□□□□ 0.24
Ercc2O08811 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.55■□□□□ 0.24
Ercc2O08811 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ercc2O08811 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ercc2O08811 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.55■□□□□ 0.24
Ercc2O08811 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.55■□□□□ 0.24
Ercc2O08811 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ercc2O08811 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ercc2O08811 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ercc2O08811 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ercc2O08811 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ercc2O08811 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ercc2O08811 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ercc2O08811 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ercc2O08811 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.54■□□□□ 0.24
Ercc2O08811 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.54■□□□□ 0.24
Ercc2O08811 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ercc2O08811 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ercc2O08811 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ercc2O08811 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.54■□□□□ 0.24
Ercc2O08811 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ercc2O08811 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ercc2O08811 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ercc2O08811 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.54■□□□□ 0.24
Ercc2O08811 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ercc2O08811 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ercc2O08811 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ercc2O08811 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ercc2O08811 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ercc2O08811 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ercc2O08811 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ercc2O08811 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ercc2O08811 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ercc2O08811 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.53■□□□□ 0.24
Ercc2O08811 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.53■□□□□ 0.24
Ercc2O08811 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Ercc2O08811 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.53■□□□□ 0.24
Ercc2O08811 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.53■□□□□ 0.24
Ercc2O08811 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ercc2O08811 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Ercc2O08811 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.52■□□□□ 0.24
Ercc2O08811 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ercc2O08811 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ercc2O08811 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Ercc2O08811 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.52■□□□□ 0.24
Ercc2O08811 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ercc2O08811 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ercc2O08811 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ercc2O08811 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ercc2O08811 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ercc2O08811 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms