Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tcof1O08784 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Tcof1O08784 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tcof1O08784 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tcof1O08784 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tcof1O08784 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tcof1O08784 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Tcof1O08784 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Tcof1O08784 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tcof1O08784 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tcof1O08784 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.89■□□□□ 0.61
Tcof1O08784 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.89■□□□□ 0.61
Tcof1O08784 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.89■□□□□ 0.61
Tcof1O08784 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tcof1O08784 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tcof1O08784 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.89■□□□□ 0.61
Tcof1O08784 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tcof1O08784 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tcof1O08784 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.89■□□□□ 0.61
Tcof1O08784 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tcof1O08784 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tcof1O08784 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tcof1O08784 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tcof1O08784 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Tcof1O08784 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tcof1O08784 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tcof1O08784 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tcof1O08784 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tcof1O08784 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Tcof1O08784 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tcof1O08784 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tcof1O08784 Gm12644-201ENSMUST00000119935 606 ntBASIC18.88■□□□□ 0.61
Tcof1O08784 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.88■□□□□ 0.61
Tcof1O08784 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tcof1O08784 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tcof1O08784 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tcof1O08784 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tcof1O08784 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tcof1O08784 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tcof1O08784 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tcof1O08784 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tcof1O08784 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tcof1O08784 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.88■□□□□ 0.61
Tcof1O08784 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tcof1O08784 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Tcof1O08784 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tcof1O08784 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tcof1O08784 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tcof1O08784 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tcof1O08784 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tcof1O08784 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.87■□□□□ 0.61
Tcof1O08784 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.87■□□□□ 0.61
Tcof1O08784 Gm28659-201ENSMUST00000188013 759 ntBASIC18.87■□□□□ 0.61
Tcof1O08784 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.87■□□□□ 0.61
Tcof1O08784 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Tcof1O08784 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tcof1O08784 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tcof1O08784 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tcof1O08784 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tcof1O08784 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Tcof1O08784 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Tcof1O08784 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 Gm43347-201ENSMUST00000200226 580 ntBASIC18.86■□□□□ 0.61
Tcof1O08784 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Tcof1O08784 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.86■□□□□ 0.61
Tcof1O08784 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tcof1O08784 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Tcof1O08784 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.85■□□□□ 0.61
Tcof1O08784 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tcof1O08784 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
Tcof1O08784 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Tcof1O08784 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tcof1O08784 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tcof1O08784 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tcof1O08784 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tcof1O08784 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Tcof1O08784 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tcof1O08784 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms