Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.45■□□□□ 0.22
Tnfrsf11bO08712 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf11bO08712 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Gm27389-201ENSMUST00000183622 195 ntBASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf11bO08712 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Gm15565-201ENSMUST00000118890 427 ntBASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.42■□□□□ 0.22
Tnfrsf11bO08712 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11bO08712 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11bO08712 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf11bO08712 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11bO08712 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11bO08712 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Tnfrsf11bO08712 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.41■□□□□ 0.22
Tnfrsf11bO08712 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11bO08712 Gm37722-201ENSMUST00000193757 208 ntBASIC16.41■□□□□ 0.22
Tnfrsf11bO08712 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Tnfrsf11bO08712 Gm21559-201ENSMUST00000220638 855 ntBASIC16.41■□□□□ 0.22
Tnfrsf11bO08712 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11bO08712 Gm8587-201ENSMUST00000076538 843 ntBASIC16.41■□□□□ 0.22
Tnfrsf11bO08712 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11bO08712 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11bO08712 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf11bO08712 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms