Protein–RNA interactions for Protein: J3QMS8

Gm3415, Predicted gene 3415, mousemouse

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3415J3QMS8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3415J3QMS8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gm3415J3QMS8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Gm3415J3QMS8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3415J3QMS8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3415J3QMS8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3415J3QMS8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3415J3QMS8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Gm10052-201ENSMUST00000168019 960 ntBASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Gm21362-201ENSMUST00000194272 928 ntBASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Gm7729-201ENSMUST00000050143 801 ntBASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
Gm3415J3QMS8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3415J3QMS8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3415J3QMS8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3415J3QMS8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3415J3QMS8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3415J3QMS8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3415J3QMS8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Gm3415J3QMS8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3415J3QMS8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Gm3415J3QMS8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3415J3QMS8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm3415J3QMS8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Gm3415J3QMS8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3415J3QMS8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3415J3QMS8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Gm3415J3QMS8 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Gm3415J3QMS8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3415J3QMS8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.22■□□□□ 0.35
Gm3415J3QMS8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3415J3QMS8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3415J3QMS8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3415J3QMS8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3415J3QMS8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3415J3QMS8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.22■□□□□ 0.35
Gm3415J3QMS8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3415J3QMS8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3415J3QMS8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm3415J3QMS8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gm3415J3QMS8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Gm3415J3QMS8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3415J3QMS8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.21■□□□□ 0.35
Gm3415J3QMS8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3415J3QMS8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3415J3QMS8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3415J3QMS8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3415J3QMS8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3415J3QMS8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3415J3QMS8 Gm27742-201ENSMUST00000184667 60 ntBASIC17.21■□□□□ 0.35
Gm3415J3QMS8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3415J3QMS8 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.21■□□□□ 0.35
Gm3415J3QMS8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Gm3415J3QMS8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm3415J3QMS8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms