Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav13d-3J3QMG8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13d-3J3QMG8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.21□□□□□ -0.13
Trav13d-3J3QMG8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav13d-3J3QMG8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Trav13d-3J3QMG8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav13d-3J3QMG8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trav13d-3J3QMG8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.21□□□□□ -0.14
Trav13d-3J3QMG8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trav13d-3J3QMG8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav13d-3J3QMG8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms