Protein–RNA interactions for Protein: J3QM41

Gm37988, Predicted gene, 37988, mousemouse

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm37988J3QM41 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm37988J3QM41 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm37988J3QM41 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm37988J3QM41 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm37988J3QM41 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm37988J3QM41 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.16□□□□□ -0.3
Gm37988J3QM41 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.16□□□□□ -0.3
Gm37988J3QM41 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm37988J3QM41 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.15□□□□□ -0.3
Gm37988J3QM41 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Gm23935-201ENSMUST00000102303 57 ntBASIC13.15□□□□□ -0.3
Gm37988J3QM41 Gm24270-201ENSMUST00000102326 57 ntBASIC13.15□□□□□ -0.3
Gm37988J3QM41 Gm14822-201ENSMUST00000122247 291 ntBASIC13.15□□□□□ -0.3
Gm37988J3QM41 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Gm24245-201ENSMUST00000157318 57 ntBASIC13.15□□□□□ -0.3
Gm37988J3QM41 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm37988J3QM41 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.15□□□□□ -0.3
Gm37988J3QM41 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Gm37988J3QM41 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Gm37988J3QM41 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.14□□□□□ -0.31
Gm37988J3QM41 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Gm37988J3QM41 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Gm37988J3QM41 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.13□□□□□ -0.31
Gm37988J3QM41 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm37988J3QM41 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm37988J3QM41 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Gm37988J3QM41 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.13□□□□□ -0.31
Gm37988J3QM41 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Gm37988J3QM41 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm37988J3QM41 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms