Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6F6VAN0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6F6VAN0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Mir770-201ENSMUST00000103252 94 ntBASIC16.63■□□□□ 0.25
Atf6F6VAN0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Atf6F6VAN0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Atf6F6VAN0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Atf6F6VAN0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.61■□□□□ 0.25
Atf6F6VAN0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6F6VAN0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6F6VAN0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Atf6F6VAN0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.61■□□□□ 0.25
Atf6F6VAN0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Atf6F6VAN0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6F6VAN0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Atf6F6VAN0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6F6VAN0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.61■□□□□ 0.25
Atf6F6VAN0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6F6VAN0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6F6VAN0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6F6VAN0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Atf6F6VAN0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6F6VAN0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6F6VAN0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6F6VAN0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6F6VAN0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6F6VAN0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.61■□□□□ 0.25
Atf6F6VAN0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6F6VAN0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6F6VAN0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atf6F6VAN0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.6■□□□□ 0.25
Atf6F6VAN0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Atf6F6VAN0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Atf6F6VAN0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 360.1 ms