Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Gm28043E0CXC2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28043E0CXC2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Gm28043E0CXC2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.25■□□□□ 0.19
Gm28043E0CXC2 Gm15565-201ENSMUST00000118890 427 ntBASIC16.25■□□□□ 0.19
Gm28043E0CXC2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.25■□□□□ 0.19
Gm28043E0CXC2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.25■□□□□ 0.19
Gm28043E0CXC2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.25■□□□□ 0.19
Gm28043E0CXC2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.25■□□□□ 0.19
Gm28043E0CXC2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Gm28043E0CXC2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28043E0CXC2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28043E0CXC2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28043E0CXC2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28043E0CXC2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28043E0CXC2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28043E0CXC2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Gm28043E0CXC2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Gm28043E0CXC2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Gm43799-201ENSMUST00000201845 579 ntBASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28043E0CXC2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Gm27000-201ENSMUST00000182943 842 ntBASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Gm2274-201ENSMUST00000184539 609 ntBASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Gm28043E0CXC2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28043E0CXC2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28043E0CXC2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28043E0CXC2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28043E0CXC2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.22■□□□□ 0.19
Gm28043E0CXC2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28043E0CXC2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28043E0CXC2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28043E0CXC2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28043E0CXC2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Gm28043E0CXC2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.22■□□□□ 0.19
Gm28043E0CXC2 Gm18958-201ENSMUST00000174258 762 ntBASIC16.22■□□□□ 0.19
Gm28043E0CXC2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.22■□□□□ 0.19
Gm28043E0CXC2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28043E0CXC2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28043E0CXC2 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.22■□□□□ 0.19
Gm28043E0CXC2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28043E0CXC2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28043E0CXC2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Gm28043E0CXC2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28043E0CXC2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28043E0CXC2 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.22■□□□□ 0.19
Gm28043E0CXC2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28043E0CXC2 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms