Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 Gm5628-201ENSMUST00000222318 1049 ntBASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 Gm18889-201ENSMUST00000174284 929 ntBASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 Gm43125-201ENSMUST00000201724 730 ntBASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Hfm1D3Z4R1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Hfm1D3Z4R1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Hfm1D3Z4R1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Hfm1D3Z4R1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Hfm1D3Z4R1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Hfm1D3Z4R1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Hfm1D3Z4R1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Hfm1D3Z4R1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Hfm1D3Z4R1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Hfm1D3Z4R1 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC22.56■■□□□ 1.2
Hfm1D3Z4R1 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC22.56■■□□□ 1.2
Hfm1D3Z4R1 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Hfm1D3Z4R1 Gm19164-201ENSMUST00000210667 640 ntBASIC22.56■■□□□ 1.2
Hfm1D3Z4R1 AC122024.2-201ENSMUST00000220086 871 ntBASIC22.56■■□□□ 1.2
Hfm1D3Z4R1 AC131187.1-201ENSMUST00000224567 809 ntBASIC22.56■■□□□ 1.2
Hfm1D3Z4R1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Hfm1D3Z4R1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Hfm1D3Z4R1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Hfm1D3Z4R1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Hfm1D3Z4R1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Hfm1D3Z4R1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Hfm1D3Z4R1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
Hfm1D3Z4R1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC22.55■■□□□ 1.2
Hfm1D3Z4R1 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC22.55■■□□□ 1.2
Hfm1D3Z4R1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC22.55■■□□□ 1.2
Hfm1D3Z4R1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Hfm1D3Z4R1 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Hfm1D3Z4R1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Hfm1D3Z4R1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Hfm1D3Z4R1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
Hfm1D3Z4R1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hfm1D3Z4R1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Hfm1D3Z4R1 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Hfm1D3Z4R1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
Hfm1D3Z4R1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hfm1D3Z4R1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Hfm1D3Z4R1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hfm1D3Z4R1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hfm1D3Z4R1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Hfm1D3Z4R1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Hfm1D3Z4R1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Hfm1D3Z4R1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
Hfm1D3Z4R1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC22.53■■□□□ 1.2
Hfm1D3Z4R1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
Hfm1D3Z4R1 Fgf17-202ENSMUST00000227123 1336 ntBASIC22.53■■□□□ 1.2
Hfm1D3Z4R1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Hfm1D3Z4R1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Hfm1D3Z4R1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Hfm1D3Z4R1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Hfm1D3Z4R1 Rprl2-201ENSMUST00000157150 290 ntBASIC22.53■■□□□ 1.2
Hfm1D3Z4R1 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
Hfm1D3Z4R1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Hfm1D3Z4R1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC22.53■■□□□ 1.2
Hfm1D3Z4R1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Hfm1D3Z4R1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Hfm1D3Z4R1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC22.53■■□□□ 1.2
Hfm1D3Z4R1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Hfm1D3Z4R1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Hfm1D3Z4R1 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Hfm1D3Z4R1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Hfm1D3Z4R1 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Hfm1D3Z4R1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Hfm1D3Z4R1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Hfm1D3Z4R1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Hfm1D3Z4R1 Gm6257-201ENSMUST00000163864 910 ntBASIC22.52■■□□□ 1.2
Hfm1D3Z4R1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC22.52■■□□□ 1.2
Hfm1D3Z4R1 Rpph1-201ENSMUST00000175096 319 ntBASIC22.52■■□□□ 1.2
Hfm1D3Z4R1 AC140397.2-201ENSMUST00000224213 834 ntBASIC22.52■■□□□ 1.2
Hfm1D3Z4R1 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Hfm1D3Z4R1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Hfm1D3Z4R1 Rarb-207ENSMUST00000225921 2756 ntBASIC22.52■■□□□ 1.2
Hfm1D3Z4R1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Hfm1D3Z4R1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Hfm1D3Z4R1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Hfm1D3Z4R1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Hfm1D3Z4R1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms