Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Gm18032-201ENSMUST00000222541 538 ntBASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim30cD3YVI9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim30cD3YVI9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30cD3YVI9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30cD3YVI9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30cD3YVI9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30cD3YVI9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Trim30cD3YVI9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30cD3YVI9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30cD3YVI9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
Trim30cD3YVI9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30cD3YVI9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim30cD3YVI9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30cD3YVI9 Gm18958-201ENSMUST00000174258 762 ntBASIC17.68■□□□□ 0.42
Trim30cD3YVI9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30cD3YVI9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30cD3YVI9 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30cD3YVI9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30cD3YVI9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim30cD3YVI9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30cD3YVI9 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.68■□□□□ 0.42
Trim30cD3YVI9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim30cD3YVI9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Gm10013-201ENSMUST00000106074 672 ntBASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim30cD3YVI9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms