Protein–RNA interactions for Protein: C0HKE1

Hist1h2ab, Histone H2A type 1-B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2abC0HKE1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hist1h2abC0HKE1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Gm11336-201ENSMUST00000118168 334 ntBASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hist1h2abC0HKE1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hist1h2abC0HKE1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist1h2abC0HKE1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist1h2abC0HKE1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist1h2abC0HKE1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.79□□□□□ -0.04
Hist1h2abC0HKE1 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.79□□□□□ -0.04
Hist1h2abC0HKE1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist1h2abC0HKE1 Mir1668-201ENSMUST00000184114 107 ntBASIC14.79□□□□□ -0.04
Hist1h2abC0HKE1 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.79□□□□□ -0.04
Hist1h2abC0HKE1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist1h2abC0HKE1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist1h2abC0HKE1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Hist1h2abC0HKE1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.79□□□□□ -0.04
Hist1h2abC0HKE1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist1h2abC0HKE1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist1h2abC0HKE1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hist1h2abC0HKE1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.78□□□□□ -0.04
Hist1h2abC0HKE1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Hist1h2abC0HKE1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h2abC0HKE1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.78□□□□□ -0.04
Hist1h2abC0HKE1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.78□□□□□ -0.04
Hist1h2abC0HKE1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h2abC0HKE1 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h2abC0HKE1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h2abC0HKE1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h2abC0HKE1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h2abC0HKE1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hist1h2abC0HKE1 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms