Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Syce3B5KM66 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Syce3B5KM66 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Syce3B5KM66 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Syce3B5KM66 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Syce3B5KM66 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Syce3B5KM66 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Syce3B5KM66 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Syce3B5KM66 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syce3B5KM66 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syce3B5KM66 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syce3B5KM66 Gm12933-201ENSMUST00000120203 872 ntBASIC18.57■□□□□ 0.56
Syce3B5KM66 Gm7638-201ENSMUST00000121348 967 ntBASIC18.57■□□□□ 0.56
Syce3B5KM66 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Syce3B5KM66 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Syce3B5KM66 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syce3B5KM66 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Syce3B5KM66 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Syce3B5KM66 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syce3B5KM66 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syce3B5KM66 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Syce3B5KM66 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syce3B5KM66 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syce3B5KM66 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syce3B5KM66 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syce3B5KM66 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syce3B5KM66 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syce3B5KM66 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Syce3B5KM66 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.56■□□□□ 0.56
Syce3B5KM66 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syce3B5KM66 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syce3B5KM66 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.56■□□□□ 0.56
Syce3B5KM66 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syce3B5KM66 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syce3B5KM66 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syce3B5KM66 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.56■□□□□ 0.56
Syce3B5KM66 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syce3B5KM66 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Syce3B5KM66 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Syce3B5KM66 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syce3B5KM66 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.56■□□□□ 0.56
Syce3B5KM66 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syce3B5KM66 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Syce3B5KM66 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syce3B5KM66 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syce3B5KM66 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.55■□□□□ 0.56
Syce3B5KM66 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syce3B5KM66 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Syce3B5KM66 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syce3B5KM66 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syce3B5KM66 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syce3B5KM66 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Syce3B5KM66 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Syce3B5KM66 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Syce3B5KM66 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Syce3B5KM66 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.55■□□□□ 0.56
Syce3B5KM66 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.55■□□□□ 0.56
Syce3B5KM66 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syce3B5KM66 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syce3B5KM66 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syce3B5KM66 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syce3B5KM66 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Syce3B5KM66 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Syce3B5KM66 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syce3B5KM66 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Syce3B5KM66 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Syce3B5KM66 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syce3B5KM66 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syce3B5KM66 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Syce3B5KM66 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Syce3B5KM66 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Syce3B5KM66 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC18.54■□□□□ 0.56
Syce3B5KM66 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Syce3B5KM66 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Syce3B5KM66 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC18.54■□□□□ 0.56
Syce3B5KM66 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Syce3B5KM66 Gm12085-201ENSMUST00000119263 940 ntBASIC18.54■□□□□ 0.56
Syce3B5KM66 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syce3B5KM66 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.54■□□□□ 0.56
Syce3B5KM66 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syce3B5KM66 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Syce3B5KM66 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syce3B5KM66 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Syce3B5KM66 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syce3B5KM66 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syce3B5KM66 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syce3B5KM66 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syce3B5KM66 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Syce3B5KM66 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Syce3B5KM66 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syce3B5KM66 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syce3B5KM66 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syce3B5KM66 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Syce3B5KM66 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Syce3B5KM66 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Syce3B5KM66 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Syce3B5KM66 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Syce3B5KM66 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Syce3B5KM66 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.53■□□□□ 0.56
Syce3B5KM66 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms