Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp42B2RQC2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp42B2RQC2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp42B2RQC2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp42B2RQC2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp42B2RQC2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Usp42B2RQC2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp42B2RQC2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp42B2RQC2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Usp42B2RQC2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Usp42B2RQC2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp42B2RQC2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp42B2RQC2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Usp42B2RQC2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp42B2RQC2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp42B2RQC2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp42B2RQC2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp42B2RQC2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Usp42B2RQC2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Usp42B2RQC2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp42B2RQC2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.9■□□□□ 0.62
Usp42B2RQC2 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.9■□□□□ 0.62
Usp42B2RQC2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp42B2RQC2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp42B2RQC2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Usp42B2RQC2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Usp42B2RQC2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Usp42B2RQC2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.9■□□□□ 0.62
Usp42B2RQC2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp42B2RQC2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Usp42B2RQC2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Usp42B2RQC2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Usp42B2RQC2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp42B2RQC2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp42B2RQC2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp42B2RQC2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.89■□□□□ 0.61
Usp42B2RQC2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp42B2RQC2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp42B2RQC2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp42B2RQC2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp42B2RQC2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Usp42B2RQC2 Gm44454-201ENSMUST00000198541 138 ntBASIC18.89■□□□□ 0.61
Usp42B2RQC2 Gm18669-201ENSMUST00000216049 778 ntBASIC18.89■□□□□ 0.61
Usp42B2RQC2 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.89■□□□□ 0.61
Usp42B2RQC2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp42B2RQC2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp42B2RQC2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp42B2RQC2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp42B2RQC2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.88■□□□□ 0.61
Usp42B2RQC2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp42B2RQC2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp42B2RQC2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.88■□□□□ 0.61
Usp42B2RQC2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Usp42B2RQC2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Usp42B2RQC2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp42B2RQC2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.88■□□□□ 0.61
Usp42B2RQC2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp42B2RQC2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp42B2RQC2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp42B2RQC2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp42B2RQC2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.88■□□□□ 0.61
Usp42B2RQC2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.88■□□□□ 0.61
Usp42B2RQC2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp42B2RQC2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp42B2RQC2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp42B2RQC2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp42B2RQC2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Usp42B2RQC2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp42B2RQC2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp42B2RQC2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp42B2RQC2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.88■□□□□ 0.61
Usp42B2RQC2 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.87■□□□□ 0.61
Usp42B2RQC2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp42B2RQC2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp42B2RQC2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp42B2RQC2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp42B2RQC2 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.86■□□□□ 0.61
Usp42B2RQC2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp42B2RQC2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms