Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Chd3B1AR17 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.77■□□□□ 0.12
Chd3B1AR17 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.77■□□□□ 0.12
Chd3B1AR17 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.77■□□□□ 0.12
Chd3B1AR17 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.77■□□□□ 0.12
Chd3B1AR17 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.77■□□□□ 0.12
Chd3B1AR17 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chd3B1AR17 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.77■□□□□ 0.12
Chd3B1AR17 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.77■□□□□ 0.12
Chd3B1AR17 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chd3B1AR17 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.77■□□□□ 0.12
Chd3B1AR17 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chd3B1AR17 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chd3B1AR17 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chd3B1AR17 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Chd3B1AR17 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chd3B1AR17 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Chd3B1AR17 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chd3B1AR17 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Chd3B1AR17 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Chd3B1AR17 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chd3B1AR17 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chd3B1AR17 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chd3B1AR17 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
Chd3B1AR17 Gm5682-201ENSMUST00000173402 505 ntBASIC15.77■□□□□ 0.11
Chd3B1AR17 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Chd3B1AR17 Gm6550-201ENSMUST00000187574 993 ntBASIC15.77■□□□□ 0.11
Chd3B1AR17 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.77■□□□□ 0.11
Chd3B1AR17 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chd3B1AR17 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chd3B1AR17 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chd3B1AR17 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chd3B1AR17 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chd3B1AR17 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chd3B1AR17 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd3B1AR17 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Chd3B1AR17 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd3B1AR17 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Chd3B1AR17 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd3B1AR17 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd3B1AR17 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Chd3B1AR17 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd3B1AR17 Grk6-207ENSMUST00000225925 2769 ntBASIC15.76■□□□□ 0.11
Chd3B1AR17 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd3B1AR17 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd3B1AR17 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd3B1AR17 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.76■□□□□ 0.11
Chd3B1AR17 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd3B1AR17 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd3B1AR17 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.76■□□□□ 0.11
Chd3B1AR17 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd3B1AR17 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Chd3B1AR17 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd3B1AR17 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd3B1AR17 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd3B1AR17 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd3B1AR17 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd3B1AR17 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Chd3B1AR17 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Chd3B1AR17 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.76■□□□□ 0.11
Chd3B1AR17 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd3B1AR17 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Chd3B1AR17 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd3B1AR17 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd3B1AR17 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Chd3B1AR17 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd3B1AR17 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chd3B1AR17 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chd3B1AR17 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.75■□□□□ 0.11
Chd3B1AR17 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.75■□□□□ 0.11
Chd3B1AR17 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd3B1AR17 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chd3B1AR17 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.75■□□□□ 0.11
Chd3B1AR17 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Chd3B1AR17 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Chd3B1AR17 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd3B1AR17 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd3B1AR17 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
Chd3B1AR17 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Chd3B1AR17 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.75■□□□□ 0.11
Chd3B1AR17 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.75■□□□□ 0.11
Chd3B1AR17 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd3B1AR17 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Chd3B1AR17 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.75■□□□□ 0.11
Chd3B1AR17 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.75■□□□□ 0.11
Chd3B1AR17 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd3B1AR17 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chd3B1AR17 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chd3B1AR17 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd3B1AR17 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Chd3B1AR17 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd3B1AR17 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd3B1AR17 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd3B1AR17 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd3B1AR17 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chd3B1AR17 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chd3B1AR17 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Chd3B1AR17 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms