Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Mir6956-201ENSMUST00000183598 62 ntBASIC13.59□□□□□ -0.23
Col6a4A2AX52 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a4A2AX52 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col6a4A2AX52 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col6a4A2AX52 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.58□□□□□ -0.23
Col6a4A2AX52 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Col6a4A2AX52 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.58□□□□□ -0.23
Col6a4A2AX52 Gm20949-201ENSMUST00000206478 952 ntBASIC13.58□□□□□ -0.23
Col6a4A2AX52 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.58□□□□□ -0.24
Col6a4A2AX52 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a4A2AX52 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a4A2AX52 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.58□□□□□ -0.24
Col6a4A2AX52 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.58□□□□□ -0.24
Col6a4A2AX52 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a4A2AX52 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Mir8117-201ENSMUST00000184773 107 ntBASIC13.57□□□□□ -0.24
Col6a4A2AX52 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.57□□□□□ -0.24
Col6a4A2AX52 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Gm14057-201ENSMUST00000120631 482 ntBASIC13.57□□□□□ -0.24
Col6a4A2AX52 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.57□□□□□ -0.24
Col6a4A2AX52 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.57□□□□□ -0.24
Col6a4A2AX52 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col6a4A2AX52 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a4A2AX52 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Col6a4A2AX52 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Col6a4A2AX52 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a4A2AX52 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a4A2AX52 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a4A2AX52 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a4A2AX52 Gm5112-201ENSMUST00000204407 2368 ntBASIC13.56□□□□□ -0.24
Col6a4A2AX52 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a4A2AX52 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a4A2AX52 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a4A2AX52 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a4A2AX52 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.56□□□□□ -0.24
Col6a4A2AX52 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.56□□□□□ -0.24
Col6a4A2AX52 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a4A2AX52 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a4A2AX52 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a4A2AX52 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a4A2AX52 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a4A2AX52 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms