Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
Gm3854A0A1B0GSS6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3854A0A1B0GSS6 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Gm9727-201ENSMUST00000161387 555 ntBASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Gm43575-201ENSMUST00000196420 516 ntBASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm3854A0A1B0GSS6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm3854A0A1B0GSS6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3854A0A1B0GSS6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3854A0A1B0GSS6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Gm3854A0A1B0GSS6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3854A0A1B0GSS6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3854A0A1B0GSS6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3854A0A1B0GSS6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3854A0A1B0GSS6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.11■□□□□ 0.17
Gm3854A0A1B0GSS6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.11■□□□□ 0.17
Gm3854A0A1B0GSS6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm3854A0A1B0GSS6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.11■□□□□ 0.17
Gm3854A0A1B0GSS6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms