Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv17A0A140T8P8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Gm11355-201ENSMUST00000121120 306 ntBASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trbv17A0A140T8P8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Trbv17A0A140T8P8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trbv17A0A140T8P8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trbv17A0A140T8P8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Gm18032-201ENSMUST00000222541 538 ntBASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv17A0A140T8P8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Gm18421-201ENSMUST00000204122 625 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms